RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 PRNDQ9UKY0 176 aa8.48□□□□□ -1.05
GPNMB-214ENST00000492858 SSX5O60225 188 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 NAT1P18440 290 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 CRYBB3P26998 211 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 G6PCP35575 357 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 TAS2R20P59543 309 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 DAD1P61803 113 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 TMEM17Q86X19 198 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 LYPD1Q8N2G4 141 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 FRZBQ92765 325 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 NARS2Q96I59 477 aaKnown RBP8.47□□□□□ -1.05
GPNMB-214ENST00000492858 DIABLOQ9NR28 239 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 FKBP11Q9NYL4 201 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 V9GYH0 126 aa8.47□□□□□ -1.05
GPNMB-214ENST00000492858 EIF2B2P49770 351 aaKnown RBP8.46□□□□□ -1.06
GPNMB-214ENST00000492858 PPP5CP53041 499 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 FXYD7P58549 80 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 GSG1LQ6UXU4 331 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 ZNF114Q8NC26 417 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 GPX8Q8TED1 209 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 FCAMRQ8WWV6 532 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 ABHD1Q96SE0 405 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 YTHDF2Q9Y5A9 579 aaKnown RBP8.46□□□□□ -1.06
GPNMB-214ENST00000492858 HMCN2Q8NDA2 5059 aa8.46□□□□□ -1.06
GPNMB-214ENST00000492858 TRAV18A0A075B6X5 111 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 LOC102723971A0A1B0GUV8 181 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 GSTZ1O43708 216 aaPredicted RBP8.45□□□□□ -1.06
GPNMB-214ENST00000492858 TMEM50AO95807 157 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 IGKV3-20P01619 116 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 RLN1P04808 185 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 HLA-DRB4P13762 266 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 F2RP25116 425 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 LPAR6P43657 344 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 XGP55808 180 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 SNRPD3P62318 126 aaKnown RBP8.45□□□□□ -1.06
GPNMB-214ENST00000492858 ZNF79Q15937 498 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 BEST4Q8NFU0 473 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 SCPEP1Q9HB40 452 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 EXTL2Q9UBQ6 330 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 HLA-DRB4X5D2U9 266 aa8.45□□□□□ -1.06
GPNMB-214ENST00000492858 RPS10-NUDT3A0A1W2PQS6 291 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 FAM90A26D6RGX4 464 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 J3QL48 77 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 NUDT3O95989 172 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 CCL18P55774 89 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 MRPS10P82664 201 aaKnown RBP8.44□□□□□ -1.06
GPNMB-214ENST00000492858 TMEM69Q5SWH9 247 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 CADM3Q8N126 398 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 C15orf40Q8WUR7 153 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 TSC22D3Q99576 134 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 SDHCQ99643 169 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-214ENST00000492858 LINC00588Q9Y4M8 146 aa8.44□□□□□ -1.06
GPNMB-214ENST00000492858 HBE1P02100 147 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 FCER2P06734 321 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 BTF3P20290 206 aaKnown RBP8.43□□□□□ -1.06
GPNMB-214ENST00000492858 GNRHRP30968 328 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 DLK1P80370 383 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 ERHP84090 104 aaKnown RBP8.43□□□□□ -1.06
GPNMB-214ENST00000492858 SSBP1Q04837 148 aaKnown RBP8.43□□□□□ -1.06
GPNMB-214ENST00000492858 GDF5OSQ5U4N7 250 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 HOGA1Q86XE5 327 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 SMIM4Q8WVI0 70 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 TMEM230Q96A57 120 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 DIRAS2Q96HU8 199 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 KRTAP1-5Q9BYS1 174 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 SRRQ9GZT4 340 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 MTFP1Q9UDX5 166 aa8.43□□□□□ -1.06
GPNMB-214ENST00000492858 GABARAPH6UMI1 98 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 RGS5O15539 181 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 PGLYRP1O75594 196 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-214ENST00000492858 S100A5P33763 92 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 CBX5P45973 191 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 AP2S1P53680 142 aaPredicted RBP8.42□□□□□ -1.06
GPNMB-214ENST00000492858 DEFB1P60022 68 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 HERV-K104P61576 105 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 PRCDQ00LT1 54 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 RRN3P1Q2M238 152 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 C16orf54Q6UWD8 224 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 LYSMD2Q8IV50 215 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 GLMPQ8WWB7 406 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 TRIM63Q969Q1 353 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 Q9H8V8 135 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 GOLT1BQ9Y3E0 138 aa8.42□□□□□ -1.06
GPNMB-214ENST00000492858 FABP12A6NFH5 140 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 FAM25AB3EWG3 89 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 FAM25CB3EWG5 89 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 FAM25GB3EWG6 89 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 PRSS3P35030 304 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 FUSP35637 526 aaKnown RBP eCLIP8.41□□□□□ -1.06
GPNMB-214ENST00000492858 SPINK9Q5DT21 86 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 SSX7Q7RTT5 188 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 ZNF709Q8N972 641 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 OR4A16Q8NH70 328 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 BORCS5Q969J3 196 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 C7orf50Q9BRJ6 194 aaKnown RBP8.41□□□□□ -1.06
GPNMB-214ENST00000492858 SEPSECSQ9HD40 501 aaKnown RBP8.41□□□□□ -1.06
GPNMB-214ENST00000492858 NRN1Q9NPD7 142 aa8.41□□□□□ -1.06
GPNMB-214ENST00000492858 MRPL36Q9P0J6 103 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms