RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	TMED4	Q7Z7H5	227 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	PDCD10	Q9BUL8	212 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	MFF	Q9GZY8	342 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	C11orf68	Q9H3H3	251 aa	Known RBP	11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	VSIR	Q9H7M9	311 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170	FRAS1	Q86XX4	4008 aa		11.27	□□□□□ -0.61
MRPL55-231	ENST00000492170		A0A0B4J2A0	478 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	CENPX	A8MT69	81 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	CORT	O00230	105 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	DFFB	O76075	338 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	CA1	P00915	261 aa	Predicted RBP	11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	IFNA17	P01571	189 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	ANXA3	P12429	323 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	UBE2M	P61081	183 aa	Known RBP	11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	CENPS	Q8N2Z9	138 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	LRTM2	Q8N967	370 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	OR11H2	Q8NH07	326 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	ST8SIA2	Q92186	375 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	TMEM231	Q9H6L2	316 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	PRR13	Q9NZ81	148 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	SHPK	Q9UHJ6	478 aa		11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
MRPL55-231	ENST00000492170	TRAV2	A0A0B4J234	112 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	PIGBOS1	A0A0B4J2F0	54 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	LINC00854	A0A1B0GVQ3	168 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	DUXB	A0A1W2PPF3	345 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	LYRM1	O43325	122 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	HOXA1	P49639	335 aa	Predicted RBP	11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	SUB1	P53999	127 aa	Known RBP eCLIP	11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	RPL11	P62913	178 aa	Known RBP	11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	PPP1R1A	Q13522	171 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	NMS	Q5H8A3	153 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	LGI3	Q8N145	548 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	OR52E5	Q8NH55	327 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	RNASE11	Q8TAA1	199 aa	Known RBP	11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	C11orf45	Q8TAV5	145 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	GPR146	Q96CH1	333 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	WDR12	Q9GZL7	423 aa	Known RBP	11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	MS4A6A	Q9H2W1	248 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	ZFAND3	Q9H8U3	227 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	ENY2	Q9NPA8	101 aa		11.25	□□□□□ -0.61
MRPL55-231	ENST00000492170	IGHV3-66	A0A0C4DH42	116 aa		11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	SCGB2A1	O75556	95 aa		11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	SFT2D2	O95562	160 aa		11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	APOH	P02749	345 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	DEFB131A	P59861	70 aa		11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	LGALS9C	Q6DKI2	356 aa		11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	CACNG5	Q9UF02	275 aa		11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170	FBXL17	Q9UF56	701 aa		11.24	□□□□□ -0.61
MRPL55-231	ENST00000492170		A0A1W2PS18	150 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	TMEM50A	O95807	157 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	IFNA4	P05014	189 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	RNASE2	P10153	161 aa	Known RBP	11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	VAMP1	P23763	118 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	NANOS2	P60321	138 aa	Known RBP	11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	SPCS3	P61009	180 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	ZNF846	Q147U1	533 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	LEMD1	Q68G75	181 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	PVRIG	Q6DKI7	326 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	LYZL2	Q7Z4W2	148 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	STH	Q8IWL8	128 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	RPP25L	Q8N5L8	163 aa	Known RBP	11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	RABAC1	Q9UI14	185 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170	FLVCR2	Q9UPI3	526 aa		11.23	□□□□□ -0.61
MRPL55-231	ENST00000492170		A0A1B0GU03	582 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	DEDD	O75618	318 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	SULT1A3	P0DMM9	295 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	SULT1A4	P0DMN0	295 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	NPPC	P23582	126 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	OPRK1	P41145	380 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	BSX	Q3C1V8	233 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	LILRB2	Q8N423	598 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	NARS2	Q96I59	477 aa	Known RBP	11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	METTL26	Q96S19	204 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	CACFD1	Q9UGQ2	172 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	TBC1D24	Q9ULP9	559 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	DNAH10	Q8IVF4	4471 aa		11.22	□□□□□ -0.61
MRPL55-231	ENST00000492170	C9orf170	A2RU37	121 aa		11.21	□□□□□ -0.61
MRPL55-231	ENST00000492170	CLN5	O75503	358 aa		11.21	□□□□□ -0.61
MRPL55-231	ENST00000492170	UPK1B	O75841	260 aa		11.21	□□□□□ -0.61
MRPL55-231	ENST00000492170	SMCO1	Q147U7	214 aa		11.21	□□□□□ -0.61
MRPL55-231	ENST00000492170	FAM24B	Q8N5W8	94 aa		11.21	□□□□□ -0.61
MRPL55-231	ENST00000492170	STXBP6	Q8NFX7	210 aa		11.21	□□□□□ -0.61
MRPL55-231	ENST00000492170	TCRB	P04435	133 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	OR4E1	P0C645	316 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	SLC25A6	P12236	298 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	DHRS2	Q13268	280 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	ASAH1	Q13510	395 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	TMEM41B	Q5BJD5	291 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	OR4X1	Q8NH49	305 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	C2CD4C	Q8TF44	421 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	C20orf85	Q9H1P6	137 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	MRPL36	Q9P0J6	103 aa	Known RBP	11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	HSPB7	Q9UBY9	170 aa		11.2	□□□□□ -0.62
MRPL55-231	ENST00000492170	VPS13D	Q5THJ4	4388 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	DEFB4A	O15263	64 aa		11.19	□□□□□ -0.62
MRPL55-231	ENST00000492170	PITX3	O75364	302 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms