RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 TRAV3A0A0B4J244 114 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 A0A0B4J2A0 478 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 CDS2O95674 445 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 IFNA17P01571 189 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 IGKV1-39P01597 117 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 IGKV1D-39P04432 117 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 FGF2P09038 288 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 HOXA1P49639 335 aaPredicted RBP10.56□□□□□ -0.72
SSR4-212ENST00000491833 DHRS2Q13268 280 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 Q56UQ5 140 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 SLC25A24Q6NUK1 477 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 SELENOHQ8IZQ5 122 aaKnown RBP10.56□□□□□ -0.72
SSR4-212ENST00000491833 OR10W1Q8NGF6 305 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 TMEM56Q96MV1 263 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 SHPKQ9UHJ6 478 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
SSR4-212ENST00000491833 IGKV3-7A0A075B6H7 116 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 IGHV3-21A0A0B4J1V1 117 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 C9orf170A2RU37 121 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 PTTG1O95997 202 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 IFNA21P01568 189 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 IGKV1-5P01602 117 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 TRAPPC2P0DI81 140 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 TRAPPC2BP0DI82 140 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 SULT1A3P0DMM9 295 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 SULT1A4P0DMN0 295 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 OR13C7P0DN81 318 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 SUPT4H1P63272 117 aaKnown RBP10.55□□□□□ -0.72
SSR4-212ENST00000491833 IFITM3Q01628 133 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 NRARPQ7Z6K4 114 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 OR1S1Q8NH92 325 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 LHFPL5Q8TAF8 219 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 LSM10Q969L4 123 aaKnown RBP10.55□□□□□ -0.72
SSR4-212ENST00000491833 RHPN1-AS1Q9BWJ2 59 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 CACNG5Q9UF02 275 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 CACFD1Q9UGQ2 172 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 F11RQ9Y624 299 aaKnown RBP10.55□□□□□ -0.72
SSR4-212ENST00000491833 TMEM56-RWDD3S4R434 201 aa10.55□□□□□ -0.72
SSR4-212ENST00000491833 IGHV4-4A0A075B6R2 117 aa10.54□□□□□ -0.72
SSR4-212ENST00000491833 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
SSR4-212ENST00000491833 CHEK1O14757 476 aa10.54□□□□□ -0.72
SSR4-212ENST00000491833 HOXB5P09067 269 aa10.54□□□□□ -0.72
SSR4-212ENST00000491833 RELQ04864 619 aaPredicted RBP10.54□□□□□ -0.72
SSR4-212ENST00000491833 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
SSR4-212ENST00000491833 CADM3Q8N126 398 aa10.54□□□□□ -0.72
SSR4-212ENST00000491833 Q8NAQ8 132 aa10.54□□□□□ -0.72
SSR4-212ENST00000491833 SCARB1Q8WTV0 552 aa10.54□□□□□ -0.72
SSR4-212ENST00000491833 DNAH17Q9UFH2 4485 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 TRAV10A0A0B4J240 114 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 PRSS29PA6NIE9 313 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 CEBPZOSA8MTT3 80 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 INMT-MINDY4F8WBC2 141 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 PRAF2O60831 178 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 PAFAH1B2P68402 229 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 SMCO1Q147U7 214 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 IZUMO4Q1ZYL8 232 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 RGS21Q2M5E4 152 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 SEC22CQ9BRL7 303 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.53□□□□□ -0.72
SSR4-212ENST00000491833 TMEM14BQ9NUH8 114 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 TMED3Q9Y3Q3 217 aa10.53□□□□□ -0.72
SSR4-212ENST00000491833 IGHV3-49A0A0A0MS15 119 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 K7EIM0 57 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 ST8SIA3O43173 380 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 YIF1AO95070 293 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 NXPH3O95157 252 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 HLA-DMBP28068 263 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.73
SSR4-212ENST00000491833 PRCDQ00LT1 54 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 SPINK9Q5DT21 86 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 PVRIGQ6DKI7 326 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 Q6ZTC4 211 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 LYZL2Q7Z4W2 148 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 GBGT1Q8N5D6 347 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 ZNF431Q8TF32 576 aaPredicted RBP10.52□□□□□ -0.73
SSR4-212ENST00000491833 GPR146Q96CH1 333 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 OR10C1Q96KK4 312 aa10.52□□□□□ -0.73
SSR4-212ENST00000491833 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 A0A0G2JRQ6 117 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 FAM25EA8MYX2 175 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 WRBO00258 174 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 NUPL2O15504 423 aaKnown RBP10.51□□□□□ -0.73
SSR4-212ENST00000491833 CD5P06127 495 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 CTSGP08311 255 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 HSPE1P61604 102 aaKnown RBP10.51□□□□□ -0.73
SSR4-212ENST00000491833 FAM90A2PQ658T7 463 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 LRTM2Q8N967 370 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 RNF126Q9BV68 326 aa10.51□□□□□ -0.73
SSR4-212ENST00000491833 IGHV3OR16-13A0A075B7E8 117 aa10.5□□□□□ -0.73
SSR4-212ENST00000491833 TRAV14DV4A0A0A6YYC5 116 aa10.5□□□□□ -0.73
SSR4-212ENST00000491833 IGHV3-74A0A0B4J1X5 117 aa10.5□□□□□ -0.73
SSR4-212ENST00000491833 A0A1B0GU03 582 aa10.5□□□□□ -0.73
SSR4-212ENST00000491833 SSNA1O43805 119 aa10.5□□□□□ -0.73
SSR4-212ENST00000491833 DFFBO76075 338 aa10.5□□□□□ -0.73
SSR4-212ENST00000491833 SCGB1D2O95969 90 aa10.5□□□□□ -0.73
SSR4-212ENST00000491833 MIFP14174 115 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms