RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 SNRPD3P62318 126 aaKnown RBP9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 OXA1LQ15070 435 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 PHLDA2Q53GA4 152 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 C16orf54Q6UWD8 224 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 C6orf223Q8N319 242 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 OR4X1Q8NH49 305 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 MRGPRFQ96AM1 343 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 NAA50Q9GZZ1 169 aaKnown RBP9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 IFT46Q9NQC8 304 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 DIABLOQ9NR28 239 aa9.65□□□□□ -0.86
CTDSP1-210ENST00000491064 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 INS-IGF2F8WCM5 200 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 CORTO00230 105 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 AP2S1P53680 142 aaPredicted RBP9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 MLANAQ16655 118 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 IZUMO4Q1ZYL8 232 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 TIGITQ495A1 244 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 TBC1D26Q86UD7 250 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 SEPSECSQ9HD40 501 aaKnown RBP9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 ANAPC10Q9UM13 185 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 TMED3Q9Y3Q3 217 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
CTDSP1-210ENST00000491064 RNASE2P10153 161 aaKnown RBP9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 OPRK1P41145 380 aa9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 CROCCP3Q8IVE0 287 aa9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 OR5H2Q8NGV7 314 aa9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 OR6F1Q8NGZ6 308 aa9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 DYNC2LI1Q8TCX1 351 aa9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 FAT1Q14517 4588 aa9.63□□□□□ -0.87
CTDSP1-210ENST00000491064 LOC100506127A0A0U1RQW1 187 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 SCGB2A1O75556 95 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 HNRNPCP07910 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 NAT1P18440 290 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 TGFBR1P36897 503 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 SUB1P53999 127 aaKnown RBP eCLIP9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 FXYD7P58549 80 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 TAS2R46P59540 309 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 VBP1P61758 197 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 NCS1P62166 190 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 IDNKQ5T6J7 187 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 GDF5OSQ5U4N7 250 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 SPATA12Q7Z6I5 190 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 SLC35G3Q8N808 338 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 C15orf53Q8NAA6 179 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 NRN1Q9NPD7 142 aa9.62□□□□□ -0.87
CTDSP1-210ENST00000491064 MYCBP2O75592 4640 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 TRAV30A0A087WSZ9 112 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 S100GP29377 79 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 NKX2-1P43699 371 aaPredicted RBP9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 RORCP51449 518 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 DEFB1P60022 68 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 SPCS2Q15005 226 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 ATG101Q9BSB4 218 aa9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 YTHDF2Q9Y5A9 579 aaKnown RBP9.61□□□□□ -0.87
CTDSP1-210ENST00000491064 VPS13BQ7Z7G8 4022 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 A0A0B4J293 547 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 IGKV1-5P01602 117 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 IGKV3-20P01619 116 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 IGLC1P0CG04 106 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 ZNF182P17025 639 aaPredicted RBP9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 HRH1P35367 487 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 LSM3P62310 102 aaKnown RBP9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 USF2Q15853 346 aaPredicted RBP9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 LPCAT3Q6P1A2 487 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 SIGLEC15Q6ZMC9 328 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 ZNF709Q8N972 641 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 AP3S1Q92572 193 aa9.6□□□□□ -0.87
CTDSP1-210ENST00000491064 LOC102723971A0A1B0GUV8 181 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 BUB3O43684 328 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 P0C879 139 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 ETV6P41212 452 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 HOXA1P49639 335 aaPredicted RBP9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 DAD1P61803 113 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 BSXQ3C1V8 233 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 LYSMD2Q8IV50 215 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 OR1S2Q8NGQ3 325 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 Q8WTZ3 238 aa9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 SAV1Q9H4B6 383 aaPredicted RBP9.59□□□□□ -0.87
CTDSP1-210ENST00000491064 HBE1P02100 147 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 HLA-DMAP28067 261 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 TAS2R20P59543 309 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 DHODHQ02127 395 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 GSG1LQ6UXU4 331 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 C1orf158Q8N1D5 194 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 S100ZQ8WXG8 99 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 S100A16Q96FQ6 103 aaKnown RBP9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 CLUHP3Q96NS8 147 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 SLIRPQ9GZT3 109 aaKnown RBP9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 SLC35B3Q9H1N7 401 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 GOLT1BQ9Y3E0 138 aa9.58□□□□□ -0.88
CTDSP1-210ENST00000491064 IL4P05112 153 aa9.57□□□□□ -0.88
CTDSP1-210ENST00000491064 OR10J1P30954 320 aa9.57□□□□□ -0.88
CTDSP1-210ENST00000491064 RPS19P39019 145 aaKnown RBP9.57□□□□□ -0.88
CTDSP1-210ENST00000491064 RND2P52198 227 aa9.57□□□□□ -0.88
CTDSP1-210ENST00000491064 AKR1C2P52895 323 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms