RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 C6orf62Q9GZU0 229 aaPredicted RBP5.38□□□□□ -1.55
PRPF4B-208ENST00000490653 TMEM222Q9H0R3 208 aa5.38□□□□□ -1.55
PRPF4B-208ENST00000490653 CACNG5Q9UF02 275 aa5.38□□□□□ -1.55
PRPF4B-208ENST00000490653 PUS1Q9Y606 427 aaKnown RBP eCLIP5.38□□□□□ -1.55
PRPF4B-208ENST00000490653 DNAH10Q8IVF4 4471 aa5.38□□□□□ -1.55
PRPF4B-208ENST00000490653 SPRY2O43597 315 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 GSTZ1O43708 216 aaPredicted RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 CLN5O75503 358 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 IGKV1-17P01599 117 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 AKAIN1P0CW23 69 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 TBPP20226 339 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 SNCAP37840 140 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 RPL5P46777 297 aaKnown RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 HOXA1P49639 335 aaPredicted RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 SUPT4H1P63272 117 aaKnown RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 RELQ04864 619 aaPredicted RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 PMS2P11Q13670 270 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 BSXQ3C1V8 233 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 LEMD1Q68G75 181 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 ZNF600Q6ZNG1 722 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 LYZL2Q7Z4W2 148 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 IL17DQ8TAD2 202 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 RAB2BQ8WUD1 216 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 RNF183Q96D59 192 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 RRNAD1Q96FB5 475 aaKnown RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 VSIRQ9H7M9 311 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 MAP6D1Q9H9H5 199 aa5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 CCDC59Q9P031 241 aaKnown RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 C14orf166Q9Y224 244 aaKnown RBP5.37□□□□□ -1.55
PRPF4B-208ENST00000490653 VPS13DQ5THJ4 4388 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 FABP12A6NFH5 140 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 OR4C46A6NHA9 309 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 AKR1C4P17516 323 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 NPBWR1P48145 328 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 DEFB131AP59861 70 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 SPCS3P61009 180 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 MRPS10P82664 201 aaKnown RBP5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 DHODHQ02127 395 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 SSBP1Q04837 148 aaKnown RBP5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 AARDQ4LEZ3 155 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 PRSS54Q6PEW0 395 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 LYG2Q86SG7 212 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 OR4X1Q8NH49 305 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 OR52E5Q8NH55 327 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 MCFD2Q8NI22 146 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 RNASE11Q8TAA1 199 aaKnown RBP5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 C15orf40Q8WUR7 153 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 RBPMSQ93062 196 aaKnown RBP5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 GALNT14Q96FL9 552 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 PDCD10Q9BUL8 212 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 MS4A6AQ9H2W1 248 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 ENY2Q9NPA8 101 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 HEYLQ9NQ87 328 aaPredicted RBP5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 TMEM56-RWDD3S4R434 201 aa5.36□□□□□ -1.55
PRPF4B-208ENST00000490653 KNCNA6PVL3 124 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 CEBPZOSA8MTT3 80 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 DEFB4AO15263 64 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 ATG12O94817 140 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 GIG44P09565 113 aaPredicted RBP5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 OPRK1P41145 380 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 SUB1P53999 127 aaKnown RBP eCLIP5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 APOC4P55056 127 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 RPL11P62913 178 aaKnown RBP5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 KLF9Q13886 244 aaPredicted RBP5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 C2orf83Q53S99 150 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 Q6ZWC4 215 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 STPG3Q8N7X2 389 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 NPIPB3Q92617 1050 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 CSTL1Q9H114 145 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 RBKSQ9H477 322 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 MCUBQ9NWR8 336 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 ABCA13Q86UQ4 5058 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 KMT2AQ03164 3969 aa5.35□□□□□ -1.55
PRPF4B-208ENST00000490653 KIR2DL5BA0A0G2JN68 375 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 KIR2DL5BA0A0G2JPC4 375 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 K7EQG2 157 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 DNASE2O00115 360 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 IGLC1P0CG04 106 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 NPPCP23582 126 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 CRYBB3P26998 211 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 BMI1P35226 326 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 RND2P52198 227 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 DEFB1P60022 68 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 SURF2Q15527 256 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 USF2Q15853 346 aaPredicted RBP5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 ZNF79Q15937 498 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 PYDC2Q56P42 97 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 NMSQ5H8A3 153 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 FAM219AQ8IW50 185 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 KIR2DL5AQ8N109 375 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 KIR2DL5BQ8NHK3 375 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 TRIM63Q969Q1 353 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 PRRT1Q99946 306 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 BCL7BQ9BQE9 202 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 RSL24D1Q9UHA3 163 aaKnown RBP5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 RABAC1Q9UI14 185 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 V9GYH0 126 aa5.34□□□□□ -1.55
PRPF4B-208ENST00000490653 IGKV1D-37A0A075B6S9 117 aa5.33□□□□□ -1.56
PRPF4B-208ENST00000490653 CXorf65A6NEN9 183 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms