RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 OR13D1Q8NGV5 346 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 DCUN1D1Q96GG9 259 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 C8orf76Q96K31 380 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 U3KQ87 197 aa0.61□□□□□ -2.31
PRPF4B-207ENST00000490399 KIAA1109Q2LD37 5005 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 PIRO00625 290 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 SMIM10L2AP0DMW4 78 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 SMIM10L2BP0DMW5 78 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 S100A4P26447 101 aaKnown RBP0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 LINC01554Q52M75 96 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 CLECL1Q8IZS7 167 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 C3orf56Q8N813 242 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 OR10J5Q8NHC4 309 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 AMELYQ99218 206 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 VPS29Q9UBQ0 182 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 PEAK1Q9H792 1746 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 PKD1L2Q7Z442 2459 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 NAV2Q8IVL1 2488 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 MYO18AQ92614 2054 aaKnown RBP0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 ZDBF2Q9HCK1 2354 aa0.6□□□□□ -2.31
PRPF4B-207ENST00000490399 ADGRB2O60241 1585 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 CLDN24A6NM45 220 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 M0R036 132 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 INE1O15225 51 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 TRAPPC6BQ86SZ2 158 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 SBSPONQ8IVN8 264 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 KRT222Q8N1A0 295 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 CLDN22Q8N7P3 220 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 DCSTAMPQ9H295 470 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 RASL12Q9NYN1 266 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 EPDR1Q9UM22 224 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 SLC35A3Q9Y2D2 325 aa0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 V9GYY5 206 aaPredicted RBP0.59□□□□□ -2.31
PRPF4B-207ENST00000490399 MUC2Q02817 5179 aa0.59□□□□□ -2.32
PRPF4B-207ENST00000490399 KIAA1549Q9HCM3 1950 aa0.59□□□□□ -2.32
PRPF4B-207ENST00000490399 C1orf196B1AJZ1 125 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 ZNF736B4DX44 427 aaPredicted RBP0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 PROSCO94903 275 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 CNIH1O95406 144 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 TTRP02766 147 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 SPRNQ5BIV9 151 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 BRMS1LQ5PSV4 323 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 WFDC5Q8TCV5 224 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 BORCS5Q969J3 196 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 CCDC90BQ9GZT6 254 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 UBAP1Q9NZ09 502 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 CYSLTR1Q9Y271 337 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 HS3ST2Q9Y278 367 aa0.58□□□□□ -2.32
PRPF4B-207ENST00000490399 NAV3Q8IVL0 2385 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 MACF1Q9UPN3 7388 aaKnown RBP0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 NEO1Q92859 1461 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 CLDN25C9JDP6 229 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 LYPLA2O95372 231 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 DNAL4O96015 105 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 RBP1P09455 135 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 OR4E1P0C645 316 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 DEFA3P59666 94 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 IMPG1Q17R60 797 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 MPV17LQ2QL34 196 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 SOSTDC1Q6X4U4 206 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 C20orf27Q9GZN8 174 aa0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 UTP11Q9Y3A2 253 aaKnown RBP0.57□□□□□ -2.32
PRPF4B-207ENST00000490399 SERPINA6P08185 405 aa0.56□□□□□ -2.32
PRPF4B-207ENST00000490399 ESRGQ1W209 222 aa0.56□□□□□ -2.32
PRPF4B-207ENST00000490399 LINC00301Q8NCQ3 95 aa0.56□□□□□ -2.32
PRPF4B-207ENST00000490399 C14orf105Q9NVL8 296 aa0.56□□□□□ -2.32
PRPF4B-207ENST00000490399 MED1Q15648 1581 aaPredicted RBP0.56□□□□□ -2.32
PRPF4B-207ENST00000490399 OBSL1O75147 1896 aa0.56□□□□□ -2.32
PRPF4B-207ENST00000490399 ALPK3Q96L96 1907 aa0.56□□□□□ -2.32
PRPF4B-207ENST00000490399 PLXNA4Q9HCM2 1894 aa0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 NCR3O14931 201 aa0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 RPS17P08708 135 aaKnown RBP0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 SMIM17P0DL12 118 aa0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 CASP1P29466 404 aa0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 YPEL3P61236 119 aaPredicted RBP0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 C12orf45Q8N5I9 185 aaPredicted RBP0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 ADAT3Q96EY9 351 aaPredicted RBP0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 CCDC42Q96M95 316 aa0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 C6orf62Q9GZU0 229 aaPredicted RBP0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 NHP2Q9NX24 153 aaKnown RBP0.55□□□□□ -2.32
PRPF4B-207ENST00000490399 A0A087WUJ7 227 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 A0A087X0T9 212 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 hADV38S2A0JD32 116 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 CCL25O15444 150 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 C12orf74Q32Q52 190 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 TRAPPC5Q8IUR0 188 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 OR8D4Q8NGM9 314 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 CT55Q8WUE5 264 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 RNASE7Q9H1E1 156 aaKnown RBP0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 ADCY9O60503 1353 aa0.54□□□□□ -2.32
PRPF4B-207ENST00000490399 CACNA1EQ15878 2313 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 hCG_1818297A0A087WSY0 165 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 A8MT66 165 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 ZNF682O95780 498 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 OMPP47874 163 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 TSNQ15631 228 aaKnown RBP0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 HIST1H2BLQ99880 126 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 CMSS1Q9BQ75 279 aaKnown RBP0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 BCL2L10Q9HD36 194 aa0.53□□□□□ -2.32
PRPF4B-207ENST00000490399 UQCC1Q9NVA1 299 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms