RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 SNCAP37840 140 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 RPL5P46777 297 aaKnown RBP5.82□□□□□ -1.48
USP39-216ENST00000490193 RFX2P48378 723 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 PPP5CP53041 499 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 AP2S1P53680 142 aaPredicted RBP5.82□□□□□ -1.48
USP39-216ENST00000490193 TAS2R46P59540 309 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 DHRS2Q13268 280 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 PSMG4Q5JS54 123 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 OR6F1Q8NGZ6 308 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 GLMPQ8WWB7 406 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 NRG4Q8WWG1 115 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 FNDC4Q9H6D8 234 aaPredicted RBP5.82□□□□□ -1.48
USP39-216ENST00000490193 IFT46Q9NQC8 304 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 MRPL36Q9P0J6 103 aaKnown RBP5.82□□□□□ -1.48
USP39-216ENST00000490193 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 DKK2Q9UBU2 259 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 SSR3Q9UNL2 185 aa5.82□□□□□ -1.48
USP39-216ENST00000490193 DNAH5Q8TE73 4624 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 MEIS3P1A6NDR6 274 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 FAM90A26D6RGX4 464 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 SCGB2A1O75556 95 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 SCGB1D2O95969 90 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 P0C879 139 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 RNASE2P10153 161 aaKnown RBP5.81□□□□□ -1.48
USP39-216ENST00000490193 HLA-DRB4P13762 266 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 S100GP29377 79 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 SUB1P53999 127 aaKnown RBP eCLIP5.81□□□□□ -1.486e-9■■■□□ 18
USP39-216ENST00000490193 GABARAPL2P60520 117 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 SNRPD3P62318 126 aaKnown RBP5.81□□□□□ -1.48
USP39-216ENST00000490193 BSXQ3C1V8 233 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 LPCAT3Q6P1A2 487 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 TBC1D26Q86UD7 250 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 OR5H2Q8NGV7 314 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 TMEM230Q96A57 120 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 MRGPRFQ96AM1 343 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 CLUHP3Q96NS8 147 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 NIPSNAP3BQ9BS92 247 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 RNF167Q9H6Y7 350 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 RFNGQ9Y644 331 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 HLA-DRB4X5D2U9 266 aa5.81□□□□□ -1.48
USP39-216ENST00000490193 TRAV30A0A087WSZ9 112 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 PMP2P02689 132 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 CLEC2LP0C7M8 214 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 PSMB9P28065 219 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 NKX2-1P43699 371 aaPredicted RBP5.8□□□□□ -1.48
USP39-216ENST00000490193 HOXA1P49639 335 aaPredicted RBP5.8□□□□□ -1.48
USP39-216ENST00000490193 UCP3P55916 312 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 MXD1Q05195 221 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 PHLDA2Q53GA4 152 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 IDNKQ5T6J7 187 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 FAM222AQ5U5X8 452 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 SLC35G3Q8N808 338 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 C15orf53Q8NAA6 179 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 FCGR1BQ92637 280 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 NRN1Q9NPD7 142 aa5.8□□□□□ -1.48
USP39-216ENST00000490193 A0A0B4J293 547 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 IGKV1-5P01602 117 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 IGLC1P0CG04 106 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 HRH1P35367 487 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 OPRK1P41145 380 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 HSPA13P48723 471 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 YPEL3P61236 119 aaPredicted RBP5.79□□□□□ -1.48
USP39-216ENST00000490193 IZUMO4Q1ZYL8 232 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 TIGITQ495A1 244 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 SPINK9Q5DT21 86 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 TMEM88Q6PEY1 159 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 LYSMD2Q8IV50 215 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 SPARTQ8N0X7 666 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 OR1S2Q8NGQ3 325 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 S100A16Q96FQ6 103 aaKnown RBP5.79□□□□□ -1.48
USP39-216ENST00000490193 CNBD2Q96M20 576 aa5.79□□□□□ -1.48
USP39-216ENST00000490193 NBDYA0A0U1RRE5 68 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 RPS10-NUDT3A0A1W2PQS6 291 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 BUB3O43684 328 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 GSTZ1O43708 216 aaPredicted RBP5.78□□□□□ -1.48
USP39-216ENST00000490193 ALDH3B2P48448 385 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 EMP1P54849 157 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 TAS2R20P59543 309 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 RND3P61587 244 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 USF2Q15853 346 aaPredicted RBP5.78□□□□□ -1.48
USP39-216ENST00000490193 MLANAQ16655 118 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 AARDQ4LEZ3 155 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 UBE2NLQ5JXB2 153 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 GDF5OSQ5U4N7 250 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 SIGLEC15Q6ZMC9 328 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 SLC7A5P1Q8MH63 180 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 C6orf223Q8N319 242 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 ZNF709Q8N972 641 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 Q8WTZ3 238 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 YTHDF1Q9BYJ9 559 aaKnown RBP5.78□□□□□ -1.48
USP39-216ENST00000490193 SCRT2Q9NQ03 307 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 TMED3Q9Y3Q3 217 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 UBR4Q5T4S7 5183 aa5.78□□□□□ -1.48
USP39-216ENST00000490193 ATG12O94817 140 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 SLC25A4P12235 298 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 HLA-DMAP28067 261 aa5.77□□□□□ -1.49
USP39-216ENST00000490193 PRSS3P35030 304 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms