RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 RAB9AP51151 201 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 PLP1P60201 277 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 WT1-ASQ06250 92 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 PAX8Q06710 450 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 TMEM241Q24JQ0 296 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 ACSM6Q6P461 480 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 SPNS3Q6ZMD2 512 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 CYP2G1PQ6ZSU1 146 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 C16orf82Q7Z2V1 217 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 ABHD5Q8WTS1 349 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 CFHR4Q92496 578 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 ANAPC16Q96DE5 110 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 PERPQ96FX8 193 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 EAF1Q96JC9 268 aaPredicted RBP5.09□□□□□ -1.59
SF3A3-208ENST00000489537 TXN2Q99757 166 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 SCRT1Q9BWW7 348 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 TMEM231Q9H6L2 316 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 SLC25A22Q9H936 323 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 BIN3Q9NQY0 253 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 C19orf73Q9NVV2 129 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 DOK5Q9P104 306 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 ITPR3Q14573 2671 aa5.09□□□□□ -1.6
SF3A3-208ENST00000489537 A0A1W2PRE2 83 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 IGLC7A0M8Q6 106 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 C7orf77A4D0Y5 90 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 FAM74A7A6NL05 159 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 CLDN34H7C241 214 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 TSPAN4O14817 238 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 NPFFO15130 113 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OPN1MWP04001 364 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OPN1MW2P0DN77 364 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OPN1MW3P0DN78 364 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 ADCYAP1P18509 176 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OR10J1P30954 320 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 LCN2P80188 198 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 FXYD3Q14802 87 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 ZNF726P1Q15940 193 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 AWAT1Q58HT5 328 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 FAM78BQ5VT40 261 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 C10orf113Q5VZT2 155 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 MIC13Q5XKP0 118 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 IQCF2Q8IXL9 164 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 TTC9CQ8N5M4 171 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 CYB561D1Q8N8Q1 229 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OR51G1Q8NGK1 321 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OR4F5Q8NH21 305 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OR4X1Q8NH49 305 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 ARPC1AQ92747 370 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 RBM14Q96PK6 669 aaKnown RBP5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OR5B12Q96R08 314 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 OR4F4Q96R69 305 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 SMIM7Q9BQ49 75 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 FBXL15Q9H469 300 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 TNFRSF19Q9NS68 423 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 PUS1Q9Y606 427 aaKnown RBP eCLIP5.08□□□□□ -1.6
SF3A3-208ENST00000489537 ROS1P08922 2347 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 ABCA4P78363 2273 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 MALRD1Q5VYJ5 2156 aa5.08□□□□□ -1.6
SF3A3-208ENST00000489537 RAI1Q7Z5J4 1906 aaPredicted RBP5.07□□□□□ -1.6
SF3A3-208ENST00000489537 IGHV3-72A0A0B4J1Y9 119 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 A0A1W2PPR1 153 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 NCBP2LA6PVI3 153 aaKnown RBP5.07□□□□□ -1.6
SF3A3-208ENST00000489537 HYPMO75409 117 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 LY6HO94772 140 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 MSMBP08118 114 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 LINC00869P0C866 280 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 FOLR2P14207 255 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 CTRB1P17538 263 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 GCHFRP30047 84 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 FCGR2BP31994 310 aaPredicted RBP5.07□□□□□ -1.6
SF3A3-208ENST00000489537 RND2P52198 227 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 MFAP4P55083 255 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 RAB5BP61020 215 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 YPEL3P61236 119 aaPredicted RBP5.07□□□□□ -1.6
SF3A3-208ENST00000489537 GNB1P62873 340 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 CCL20P78556 96 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 SRSF3P84103 164 aaKnown RBP5.07□□□□□ -1.6
SF3A3-208ENST00000489537 FLI1Q01543 452 aaPredicted RBP5.07□□□□□ -1.6
SF3A3-208ENST00000489537 DIAPH2-AS1Q14236 149 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 KLK9Q2XQG4 91 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 UTF1Q5T230 341 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 CST9LP1Q5W188 147 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 CTRB2Q6GPI1 263 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 HCP5Q6MZN7 132 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 KCNIP4Q6PIL6 250 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 PRSS57Q6UWY2 283 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 Q8N6K4 173 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 ARL6IP6Q8N6S5 226 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 OR10W1Q8NGF6 305 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 VN1R17PQ8TDU5 208 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 TMEM170AQ8WVE7 144 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 C17orf50Q8WW18 174 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 SSMEM1Q8WWF3 244 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 NPIPB3Q92617 1050 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 SMIM12Q96EX1 92 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 C1orf159Q96HA4 380 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 ACY3Q96HD9 319 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 IMMP2LQ96T52 175 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 RARRES2Q99969 163 aa5.07□□□□□ -1.6
SF3A3-208ENST00000489537 SLC25A33Q9BSK2 321 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms