RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 HPRT1P00492 218 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 HBE1P02100 147 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 HLA-DRB4P13762 266 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 HIST1H1DP16402 221 aaKnown RBP6.33□□□□□ -1.4
SSBP1-212ENST00000489378 TALDO1P37837 337 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 ALDH3B2P48448 385 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 ZNF600Q6ZNG1 722 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 C1orf158Q8N1D5 194 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 OR10R2Q8NGX6 335 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 FAM3DQ96BQ1 224 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 MOB3AQ96BX8 217 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 TMPRSS5Q9H3S3 457 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 S100A14Q9HCY8 104 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 HEYLQ9NQ87 328 aaPredicted RBP6.33□□□□□ -1.4
SSBP1-212ENST00000489378 AK6Q9Y3D8 172 aaKnown RBP6.33□□□□□ -1.4
SSBP1-212ENST00000489378 OR51B2Q9Y5P1 312 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 HLA-DRB4X5D2U9 266 aa6.33□□□□□ -1.4
SSBP1-212ENST00000489378 EFCAB10A6NFE3 127 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 FAM90A26D6RGX4 464 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 CTDSP2O14595 271 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 UCHL1P09936 223 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 DNAH10OSP0CZ25 163 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 CRYBB3P26998 211 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 ERVFC1-1P60608 527 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 TMEM69Q5SWH9 247 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 ZNF709Q8N972 641 aa6.32□□□□□ -1.4
SSBP1-212ENST00000489378 PINX1Q96BK5 328 aaKnown RBP6.32□□□□□ -1.4
SSBP1-212ENST00000489378 LRP2P98164 4655 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 CIB2O75838 187 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 PRM2P04554 102 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 CTXN2P0C2S0 81 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 DEFB130BP0DP73 79 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 DEFB130AP0DP74 79 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 NUP62P37198 522 aaPredicted RBP6.31□□□□□ -1.4
SSBP1-212ENST00000489378 TAGLN2P37802 199 aaKnown RBP6.31□□□□□ -1.4
SSBP1-212ENST00000489378 WNT4P56705 351 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 ST3GAL4Q11206 333 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 SECTM1Q8WVN6 248 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 METTL26Q96S19 204 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 SCPEP1Q9HB40 452 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 RAB22AQ9UL26 194 aa6.31□□□□□ -1.4
SSBP1-212ENST00000489378 SMIM30A4D0T7 59 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 ATP6V1G2O95670 118 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 GCSHP23434 173 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 DTYMKP23919 212 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 GADD45AP24522 165 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 SNRPD3P62318 126 aaKnown RBP6.3□□□□□ -1.4
SSBP1-212ENST00000489378 RAB32Q13637 225 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 RRN3P1Q2M238 152 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 MS4A15Q8N5U1 240 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 OR51H1Q8NH63 302 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 GLMPQ8WWB7 406 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 C7orf50Q9BRJ6 194 aaKnown RBP6.3□□□□□ -1.4
SSBP1-212ENST00000489378 UPK3BQ9BT76 320 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 SLC35B3Q9H1N7 401 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 PLEKHA2Q9HB19 425 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 GOLT1BQ9Y3E0 138 aa6.3□□□□□ -1.4
SSBP1-212ENST00000489378 MARCH11A6NNE9 402 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 TMEM50AO95807 157 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 PTHLHP12272 177 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 NPBWR1P48145 328 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 GAMTQ14353 236 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 FCN2Q15485 313 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 ESRGQ1W209 222 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 HES5Q5TA89 166 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 CNIH2Q6PI25 160 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 DEFB104AQ8WTQ1 72 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 SAT2Q96F10 170 aaPredicted RBP6.29□□□□□ -1.4
SSBP1-212ENST00000489378 TMEM56Q96MV1 263 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 COMMD9Q9P000 198 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
SSBP1-212ENST00000489378 A0A087WTM6 91 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 LYRM9A8MSI8 78 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 HSBP1L1C9JCN9 74 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 MYL12BO14950 172 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 EIF2B2P49770 351 aaKnown RBP6.28□□□□□ -1.4
SSBP1-212ENST00000489378 ERVK-16P61578 105 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 CATR1Q13166 79 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 MSMO1Q15800 293 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 PQLC1Q8N2U9 271 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 NANOGP1Q8N7R0 232 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 ZNF114Q8NC26 417 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 OR13F1Q8NGS4 319 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 RAB24Q969Q5 203 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 C1orf43Q9BWL3 253 aa6.28□□□□□ -1.4
SSBP1-212ENST00000489378 FNDC4Q9H6D8 234 aaPredicted RBP6.28□□□□□ -1.4
SSBP1-212ENST00000489378 MRPL36Q9P0J6 103 aaKnown RBP6.28□□□□□ -1.4
SSBP1-212ENST00000489378 TRAV6A0A075B6T7 132 aa6.27□□□□□ -1.41
SSBP1-212ENST00000489378 ZNF705GA8MUZ8 300 aaPredicted RBP6.27□□□□□ -1.41
SSBP1-212ENST00000489378 SNAPC5O75971 98 aa6.27□□□□□ -1.41
SSBP1-212ENST00000489378 KRASP01116 189 aa6.27□□□□□ -1.41
SSBP1-212ENST00000489378 ATP5G1P05496 136 aa6.27□□□□□ -1.41
SSBP1-212ENST00000489378 FCGR2CP31995 323 aa6.27□□□□□ -1.41
SSBP1-212ENST00000489378 G6PCP35575 357 aa6.27□□□□□ -1.41
SSBP1-212ENST00000489378 NKX2-1P43699 371 aaPredicted RBP6.27□□□□□ -1.41
SSBP1-212ENST00000489378 ATP5G3P48201 142 aa6.27□□□□□ -1.41
SSBP1-212ENST00000489378 HOXA1P49639 335 aaPredicted RBP6.27□□□□□ -1.41
SSBP1-212ENST00000489378 RNASE12Q5GAN4 147 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms