RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 APOBP04114 4563 aaKnown RBP4.62□□□□□ -1.67
PTCH1-211ENST00000488809 LOC102723971A0A1B0GUV8 181 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 MEIS3P1A6NDR6 274 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 PMP2P02689 132 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 IL4P05112 153 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 SLC25A4P12235 298 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 PSMB9P28065 219 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 ID1P41134 155 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 AQP4P55087 323 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 TAS2R20P59543 309 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 SPINK9Q5DT21 86 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 TTC32Q5I0X7 151 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 IDNKQ5T6J7 187 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 SAMD13Q5VXD3 122 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 ETFRF1Q6IPR1 90 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 FOXI2Q6ZQN5 318 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 COQ8AQ8NI60 647 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 RNASE11Q8TAA1 199 aaKnown RBP4.61□□□□□ -1.67
PTCH1-211ENST00000488809 FCGR1BQ92637 280 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 SLC25A38Q96DW6 304 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 S100A16Q96FQ6 103 aaKnown RBP4.61□□□□□ -1.67
PTCH1-211ENST00000488809 CLUHP3Q96NS8 147 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 TMEM208Q9BTX3 173 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 MAGT1Q9H0U3 335 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 VCX3BQ9H321 246 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 SAV1Q9H4B6 383 aaPredicted RBP4.61□□□□□ -1.67
PTCH1-211ENST00000488809 SCPEP1Q9HB40 452 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 YTHDF2Q9Y5A9 579 aaKnown RBP4.61□□□□□ -1.67
PTCH1-211ENST00000488809 U3KQE9 123 aa4.61□□□□□ -1.67
PTCH1-211ENST00000488809 LYRM9A8MSI8 78 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 NUDT3O95989 172 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 IGKV3-20P01619 116 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 RNASE2P10153 161 aaKnown RBP4.6□□□□□ -1.67
PTCH1-211ENST00000488809 OR10J1P30954 320 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 SDC2P34741 201 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 HRH1P35367 487 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 HTR2BP41595 481 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 GABARAPL2P60520 117 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 YPEL3P61236 119 aaPredicted RBP4.6□□□□□ -1.67
PTCH1-211ENST00000488809 MXD1Q05195 221 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 CLINT1Q14677 625 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 TIGITQ495A1 244 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 TMEM69Q5SWH9 247 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 EBLN2Q6P2I7 272 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 NOXA1Q86UR1 476 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 CROCCP3Q8IVE0 287 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 OR4B1Q8NGF8 309 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 OR5H6Q8NGV6 325 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 ZNRF2Q8NHG8 242 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 RRNAD1Q96FB5 475 aaKnown RBP4.6□□□□□ -1.67
PTCH1-211ENST00000488809 LINC00052Q96N35 136 aa4.6□□□□□ -1.67
PTCH1-211ENST00000488809 M0QYG6 137 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 BUB3O43684 328 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 IGKV1-39P01597 117 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 IGKV1-17P01599 117 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 IGKV1D-39P04432 117 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 IGLC1P0CG04 106 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 INAFM2P0DMQ5 153 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 NAT1P18440 290 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 BTF3P20290 206 aaKnown RBP4.59□□□□□ -1.67
PTCH1-211ENST00000488809 PRSS3P35030 304 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 PSMB3P49720 205 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 RORCP51449 518 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 UCP3P55916 312 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 FXYD7P58549 80 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 B2MP61769 119 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 PSG9Q00887 426 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 DHODHQ02127 395 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 UBE2NLQ5JXB2 153 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 RNASEH2CQ8TDP1 164 aaKnown RBP4.59□□□□□ -1.67
PTCH1-211ENST00000488809 ZNF486Q96H40 463 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-211ENST00000488809 FNDC4Q9H6D8 234 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-211ENST00000488809 DMBT1Q9UGM3 2413 aaPredicted RBP4.59□□□□□ -1.67
PTCH1-211ENST00000488809 ANAPC10Q9UM13 185 aa4.59□□□□□ -1.67
PTCH1-211ENST00000488809 F5H768 121 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 EREGO14944 169 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 B3GALNT1O75752 331 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 TOMM40O96008 361 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 ATP5G1P05496 136 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 RD3LP0DJH9 198 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 PGAM2P15259 253 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 HLA-DMAP28067 261 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 RCVRNP35243 200 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 ETV6P41212 452 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 ATP5G3P48201 142 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 MEOX2P50222 304 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 RND2P52198 227 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 PAX9P55771 341 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 SPCS3P61009 180 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 RND3P61587 244 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 USF2Q15853 346 aaPredicted RBP4.58□□□□□ -1.68
PTCH1-211ENST00000488809 TRIM16LQ309B1 348 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 GDF5OSQ5U4N7 250 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 OR8G2PQ6IF36 304 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 FAM219AQ8IW50 185 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 ZNF709Q8N972 641 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 CCDC71LQ8N9Z2 235 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 SLC24A4Q8NFF2 622 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 OR4C16Q8NGL9 310 aa4.58□□□□□ -1.68
PTCH1-211ENST00000488809 FRZBQ92765 325 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms