RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 PAIP2BQ9ULR5 123 aaKnown RBP17.73■□□□□ 0.43
RHBDD3-205ENST00000488106 TRAV6A0A075B6T7 132 aa17.72■□□□□ 0.43
RHBDD3-205ENST00000488106 TSPAN4O14817 238 aa17.72■□□□□ 0.43
RHBDD3-205ENST00000488106 MED6O75586 246 aa17.72■□□□□ 0.43
RHBDD3-205ENST00000488106 IGKV1-17P01599 117 aa17.72■□□□□ 0.43
RHBDD3-205ENST00000488106 OR10J1P30954 320 aa17.72■□□□□ 0.43
RHBDD3-205ENST00000488106 RCHY1Q96PM5 261 aa17.72■□□□□ 0.43
RHBDD3-205ENST00000488106 ZMAT4Q9H898 229 aa17.72■□□□□ 0.43
RHBDD3-205ENST00000488106 TRAV30A0A087WSZ9 112 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 IGHV3-66A0A0C4DH42 116 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 MPTX1A8MV57 137 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 TCRBP04435 133 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 IGLC1P0CG04 106 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 OR1S2Q8NGQ3 325 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 ST8SIA2Q92186 375 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 NPIPB3Q92617 1050 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 NUDT15Q9NV35 164 aa17.71■□□□□ 0.43
RHBDD3-205ENST00000488106 IGKV3-7A0A075B6H7 116 aa17.7■□□□□ 0.42
RHBDD3-205ENST00000488106 SYNGR2O43760 224 aa17.7■□□□□ 0.42
RHBDD3-205ENST00000488106 IFNA21P01568 189 aa17.7■□□□□ 0.42
RHBDD3-205ENST00000488106 APOHP02749 345 aaPredicted RBP17.7■□□□□ 0.42
RHBDD3-205ENST00000488106 HAGHQ16775 308 aa17.7■□□□□ 0.42
RHBDD3-205ENST00000488106 TM2D3Q9BRN9 247 aa17.7■□□□□ 0.42
RHBDD3-205ENST00000488106 UBQLN2Q9UHD9 624 aa17.7■□□□□ 0.42
RHBDD3-205ENST00000488106 WRBO00258 174 aa17.69■□□□□ 0.42
RHBDD3-205ENST00000488106 WWC2-AS2Q96NR7 200 aa17.69■□□□□ 0.42
RHBDD3-205ENST00000488106 CIB3Q96Q77 187 aaPredicted RBP17.69■□□□□ 0.42
RHBDD3-205ENST00000488106 WDR12Q9GZL7 423 aaKnown RBP17.69■□□□□ 0.42
RHBDD3-205ENST00000488106 TBC1D24Q9ULP9 559 aa17.69■□□□□ 0.42
RHBDD3-205ENST00000488106 RBMY1BA6NDE4 496 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 RBMY1EA6NEQ0 496 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 OR4C46A6NHA9 309 aa17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 RBMY1DP0C7P1 496 aaKnown RBP17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 BMI1P35226 326 aa17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 TFPI2P48307 235 aa17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 ZNF846Q147U1 533 aa17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 METTL26Q96S19 204 aa17.68■□□□□ 0.42
RHBDD3-205ENST00000488106 H3BP45 60 aa17.67■□□□□ 0.42
RHBDD3-205ENST00000488106 ATP5IP56385 69 aaPredicted RBP17.67■□□□□ 0.42
RHBDD3-205ENST00000488106 RAB11AP62491 216 aa17.67■□□□□ 0.42
RHBDD3-205ENST00000488106 TCF24Q7RTU0 167 aa17.67■□□□□ 0.42
RHBDD3-205ENST00000488106 MITD1Q8WV92 249 aa17.67■□□□□ 0.42
RHBDD3-205ENST00000488106 SLC35E1Q96K37 410 aa17.67■□□□□ 0.42
RHBDD3-205ENST00000488106 FAM240BA0A1B0GVZ2 78 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 NPPCP23582 126 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 MZT2BQ6NZ67 158 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 GBGT1Q8N5D6 347 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 Q8WTZ3 238 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 SPATA25Q9BR10 227 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 SEC22CQ9BRL7 303 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 VSIRQ9H7M9 311 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 BATF3Q9NR55 127 aa17.66■□□□□ 0.42
RHBDD3-205ENST00000488106 UPK1BO75841 260 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 SCGB1D2O95969 90 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 H2AFB2P0C5Z0 115 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 NKX2-1P43699 371 aaPredicted RBP17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 YPEL3P61236 119 aaPredicted RBP17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 POLR2GP62487 172 aaKnown RBP eCLIP17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 ASAH1Q13510 395 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 ODF3L2Q3SX64 289 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 SPANXN5Q5MJ07 72 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 LINC00322Q6ZN03 302 aaPredicted RBP17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 LILRB2Q8N423 598 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 OR4D5Q8NGN0 318 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 TMEM231Q9H6L2 316 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 AGRNO00468 2067 aa17.65■□□□□ 0.42
RHBDD3-205ENST00000488106 CCSO14618 274 aa17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 SSSCA1O60232 199 aa17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 DFFBO76075 338 aa17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 GPX4P36969 197 aaPredicted RBP17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 RPL11P62913 178 aaKnown RBP17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 RPP30P78346 268 aaKnown RBP17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 GAMTQ14353 236 aa17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 IAH1Q2TAA2 248 aaPredicted RBP17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 FAM90A2PQ658T7 463 aa17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 CITED4Q96RK1 184 aa17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 RETNQ9HD89 108 aa17.64■□□□□ 0.41
RHBDD3-205ENST00000488106 DNAH7Q8WXX0 4024 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 A0A1W2PS18 150 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 ZFP92A6NM28 416 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 TOMM40O96008 361 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 IL4P05112 153 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 CRYBB3P26998 211 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 ID3Q02535 119 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 NARS2Q96I59 477 aaKnown RBP17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 GSKIPQ9P0R6 139 aa17.63■□□□□ 0.41
RHBDD3-205ENST00000488106 RD3LP0DJH9 198 aa17.62■□□□□ 0.41
RHBDD3-205ENST00000488106 P2RY1P47900 373 aa17.62■□□□□ 0.41
RHBDD3-205ENST00000488106 USF2Q15853 346 aaPredicted RBP17.62■□□□□ 0.41
RHBDD3-205ENST00000488106 WFDC3Q8IUB2 231 aa17.62■□□□□ 0.41
RHBDD3-205ENST00000488106 ZBTB8BQ8NAP8 495 aaPredicted RBP17.62■□□□□ 0.41
RHBDD3-205ENST00000488106 ZNF431Q8TF32 576 aaPredicted RBP17.62■□□□□ 0.41
RHBDD3-205ENST00000488106 STRAPQ9Y3F4 350 aaKnown RBP17.62■□□□□ 0.41
RHBDD3-205ENST00000488106 PSG1P11464 419 aa17.61■□□□□ 0.41
RHBDD3-205ENST00000488106 ENKURQ8TC29 256 aa17.61■□□□□ 0.41
RHBDD3-205ENST00000488106 GGTLC1Q9BX51 225 aa17.61■□□□□ 0.41
RHBDD3-205ENST00000488106 PSENENQ9NZ42 101 aa17.61■□□□□ 0.41
RHBDD3-205ENST00000488106 LOC102724200A0A096LPH7 203 aaPredicted RBP17.6■□□□□ 0.41
RHBDD3-205ENST00000488106 FAM25EA8MYX2 175 aa17.6■□□□□ 0.41
RHBDD3-205ENST00000488106 DNASE2O00115 360 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms