RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 TINCRA0A1B0GVN0 87 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 EXOC1LA0A1B0GW35 172 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 FAM183AA6NL82 134 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 C17orf98A8MV24 154 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 FTCDNL1E5RQL4 147 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 LY6LH3BQJ8 138 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 I3L4J1 428 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 M0R143 59 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 CORTO00230 105 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 BHLHE40O14503 412 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 GNG7O60262 68 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 MPZL2O60487 215 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 EDF1O60869 148 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR2B3O76000 313 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TNFSF15O95150 251 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SOX14O95416 240 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 ZNF682O95780 498 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 IFNA17P01571 189 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 ORM1P02763 201 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SERPINE1P05121 402 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 NMBP08949 121 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TSPAN19P0C672 248 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 GZMBP10144 247 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 UCHL3P15374 230 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 UGT2B7P16662 529 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 ALOX5APP20292 161 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 RPS3P23396 243 aaKnown RBP eCLIP0.73□□□□□ -2.29
SMC4-220ENST00000488017 RPS12P25398 132 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 MIPP30301 263 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TSPOP30536 169 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SDC4P31431 198 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 AQP4P55087 323 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 ARPP19P56211 112 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR4D2P58180 307 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 UBE2KP61086 200 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SNRPD2P62316 118 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 TBPL1P62380 186 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 CAV1Q03135 178 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 PRDX1Q06830 199 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 BAXQ07812 192 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 FABP9Q0Z7S8 132 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR2F1Q13607 317 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 PAFAH1B3Q15102 231 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 TMED2Q15363 201 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 MMDQ15546 238 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 LRRC75BQ2VPJ9 315 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TDRG1Q3Y452 100 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SCGB2B2Q4G0G5 96 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 MORN2Q502X0 79 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 HSD17B12Q53GQ0 312 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 MESTQ5EB52 335 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 FAM162BQ5T6X4 162 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 Q5XG85 94 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 HBMQ6B0K9 141 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 XKRXQ6PP77 449 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 IZUMO2Q6UXV1 221 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 LINC00299Q6ZSB3 139 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SSX7Q7RTT5 188 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 DEFB128Q7Z7B8 93 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 NAA40Q86UY6 237 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 DOLPP1Q86YN1 238 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 CRLF3Q8IUI8 442 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 UMODL1-AS1Q8N2C9 162 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 LRRC25Q8N386 305 aaPredicted RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 LFNGQ8NES3 379 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SLC30A7Q8NEW0 376 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR4S1Q8NGB4 309 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR4K17Q8NGC6 315 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR13C4Q8NGS5 318 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR13C8Q8NGS7 320 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR2T27Q8NH04 317 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR4K13Q8NH42 304 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR4X1Q8NH49 305 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 LCN9Q8WX39 176 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TMEM203Q969S6 136 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 CCDC124Q96CT7 223 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 SMIM19Q96E16 107 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 MALSU1Q96EH3 234 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 CARD19Q96LW7 228 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TSPAN32Q96QS1 320 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR7D2Q96RA2 312 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 OR52E6Q96RD3 313 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 GPR22Q99680 433 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 MGLLQ99685 303 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 PITX2Q99697 317 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 AIF1LQ9BQI0 150 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 VPS25Q9BRG1 176 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 ADAT1Q9BUB4 502 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 TAPBPLQ9BX59 468 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TMEM133Q9H2Q1 129 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 CACYBPQ9HB71 228 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 CBLN4Q9NTU7 201 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 TAS2R13Q9NYV9 303 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 IDI2-AS1Q9NZ38 188 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 USE1Q9NZ43 259 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 MRPL27Q9P0M9 148 aaKnown RBP0.73□□□□□ -2.29
SMC4-220ENST00000488017 VPS29Q9UBQ0 182 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 SCP2D1Q9UJQ7 156 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 ERG28Q9UKR5 140 aa0.73□□□□□ -2.29
SMC4-220ENST00000488017 ANGPT4Q9Y264 503 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms