RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SLC25A2Q9BXI2 301 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 DCHS2Q6V1P9 2916 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 TRAV30A0A087WSZ9 112 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 K7EIM0 57 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 NPFFO15130 113 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 TMEM11P17152 192 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 GATA2P23769 480 aaPredicted RBP9.48□□□□□ -0.89
PKP4-213ENST00000486254 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
PKP4-213ENST00000486254 SAA4P35542 130 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 ZNF843Q8N446 348 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 Q8WTZ3 238 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 TMEM68Q96MH6 324 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 WNT10AQ9GZT5 417 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 ZNF355PQ9NSJ1 428 aa9.48□□□□□ -0.89
PKP4-213ENST00000486254 IGLV11-55A0A075B6I3 123 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 H7BYZ3 331 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 SRP14P37108 136 aaKnown RBP9.47□□□□□ -0.89
PKP4-213ENST00000486254 ATP5J2P56134 94 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 UBE2L3P68036 154 aaKnown RBP9.47□□□□□ -0.89
PKP4-213ENST00000486254 CX3CL1P78423 397 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 ZNF90Q03938 601 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 OR5AU1Q8NGC0 362 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 THYN1Q9P016 225 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 MED13LQ71F56 2210 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 ABCA2Q9BZC7 2435 aa9.47□□□□□ -0.89
PKP4-213ENST00000486254 SCO2A0A1W2PP80 73 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 HYPMO75409 117 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.89
PKP4-213ENST00000486254 GATA3P23771 443 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 S100PP25815 95 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 S100A7AQ86SG5 101 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 Q8N9W7 124 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 C2CD4CQ8TF44 421 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 OR5B12Q96R08 314 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 TMEM14CQ9P0S9 112 aa9.46□□□□□ -0.89
PKP4-213ENST00000486254 MYO18BQ8IUG5 2567 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 TRBV20OR9-2A0A075B6H5 130 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 TRAV9-1A0A075B6T8 112 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 IGHV4-61A0A0C4DH41 118 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 GGTLC3B5MD39 225 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 SCGB2A1O75556 95 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 IGKV1-17P01599 117 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 RNF224P0DH78 156 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 SLC25A16P16260 332 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 HIST1H1BP16401 226 aaKnown RBP9.46□□□□□ -0.9
PKP4-213ENST00000486254 YPEL3P61236 119 aaPredicted RBP9.46□□□□□ -0.9
PKP4-213ENST00000486254 ASPHD1Q5U4P2 390 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 ZNF343Q6P1L6 599 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 C16orf82Q7Z2V1 217 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 LINC00305Q7Z4B0 112 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 BBC3Q96PG8 261 aaPredicted RBP9.46□□□□□ -0.9
PKP4-213ENST00000486254 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 PAXXQ9BUH6 204 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 OR51M1Q9H341 326 aa9.46□□□□□ -0.9
PKP4-213ENST00000486254 ABCA1O95477 2261 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 IGHV7-81A0A0B4J1V7 117 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 IGHV1-69DA0A0B4J2H0 117 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 CENPVL3A0A0U1RRI6 287 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 A0A1W2PRD5 423 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 A0A1W2PRF3 423 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 A0A1W2PRM7 423 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 GGCTO75223 188 aaKnown RBP9.45□□□□□ -0.9
PKP4-213ENST00000486254 TOMM40O96008 361 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 IGHV1-69P01742 117 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 TYMSP04818 313 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 OR10J4P0C629 311 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 MYCNOSP40205 109 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 TAS2R60P59551 318 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 NDPQ00604 133 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 SMIM12Q96EX1 92 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 FAM210BQ96KR6 192 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 FANCD2OSQ96PS1 177 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 TXN2Q99757 166 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 DERL1Q9BUN8 251 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 RNF24Q9Y225 148 aa9.45□□□□□ -0.9
PKP4-213ENST00000486254 CXCL1P09341 107 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
PKP4-213ENST00000486254 FOXL1Q12952 345 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 MORN5Q5VZ52 161 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 KCNIP4Q6PIL6 250 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 SGMS2Q8NHU3 365 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 FAM110DQ8TAY7 271 aaPredicted RBP9.44□□□□□ -0.9
PKP4-213ENST00000486254 SFRP2Q96HF1 295 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 RBM14Q96PK6 669 aaKnown RBP9.44□□□□□ -0.9
PKP4-213ENST00000486254 ATP6V0BQ99437 205 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 MEGF9Q9H1U4 602 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 MRPL27Q9P0M9 148 aaKnown RBP9.44□□□□□ -0.9
PKP4-213ENST00000486254 CDC42EP3Q9UKI2 254 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 HIGD1AQ9Y241 93 aa9.44□□□□□ -0.9
PKP4-213ENST00000486254 MDFIC2A0A1B0GVS7 189 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 C5orf52A6NGY3 159 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 NCBP2LA6PVI3 153 aaKnown RBP9.43□□□□□ -0.9
PKP4-213ENST00000486254 PSG1P11464 419 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 GP9P14770 177 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 COX6B1P14854 86 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 RPS10P46783 165 aaKnown RBP9.43□□□□□ -0.9
PKP4-213ENST00000486254 GALR1P47211 349 aa9.43□□□□□ -0.9
PKP4-213ENST00000486254 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms