RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 OR1P1Q8NH06 330 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 RAB3CQ96E17 227 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 UHRF2Q96PU4 802 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 CENPOQ9BU64 300 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 FNDC4Q9H6D8 234 aaPredicted RBP4.49□□□□□ -1.69
SMC4-217ENST00000485867 ARGLU1Q9NWB6 273 aaPredicted RBP4.49□□□□□ -1.69
SMC4-217ENST00000485867 DIMT1Q9UNQ2 313 aaKnown RBP4.49□□□□□ -1.69
SMC4-217ENST00000485867 A0A087WTM6 91 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 FAM90A26D6RGX4 464 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 SLC17A2O00624 439 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 MT-CO2P00403 227 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 IGKV3-20P01619 116 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 DEFB130BP0DP73 79 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 DEFB130AP0DP74 79 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 CRYBB3P26998 211 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 SNRPD3P62318 126 aaKnown RBP4.48□□□□□ -1.69
SMC4-217ENST00000485867 ACSM3Q53FZ2 586 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 GDF5OSQ5U4N7 250 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 ZNF709Q8N972 641 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 METTL26Q96S19 204 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 GFI1Q99684 422 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 PLGRKTQ9HBL7 147 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 MRPS16Q9Y3D3 137 aaKnown RBP4.48□□□□□ -1.69
SMC4-217ENST00000485867 GOLT1BQ9Y3E0 138 aa4.48□□□□□ -1.69
SMC4-217ENST00000485867 A0A075B6Q4 140 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 IRGMA1A4Y4 181 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 LYRM9A8MSI8 78 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 SULT1C2O00338 296 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 GYG2O15488 501 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 TNFSF12O43508 249 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 HPRT1P00492 218 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 ATP5G1P05496 136 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 P0C879 139 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 HIST1H1DP16402 221 aaKnown RBP4.47□□□□□ -1.69
SMC4-217ENST00000485867 ATP5G3P48201 142 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 HOXA1P49639 335 aaPredicted RBP4.47□□□□□ -1.69
SMC4-217ENST00000485867 PPP5CP53041 499 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 CLDN12P56749 244 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 DEFB1P60022 68 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 RAB11BQ15907 218 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 ESRGQ1W209 222 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 DNAL1Q4LDG9 190 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 HSD17B12Q53GQ0 312 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 DMBX1Q8NFW5 382 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 GLMPQ8WWB7 406 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 MOB3AQ96BX8 217 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 C7orf50Q9BRJ6 194 aaKnown RBP4.47□□□□□ -1.69
SMC4-217ENST00000485867 SEPSECSQ9HD40 501 aaKnown RBP4.47□□□□□ -1.69
SMC4-217ENST00000485867 NSG2Q9Y328 171 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 OR51B2Q9Y5P1 312 aa4.47□□□□□ -1.69
SMC4-217ENST00000485867 EFCAB10A6NFE3 127 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 DENRO43583 198 aaKnown RBP4.46□□□□□ -1.7
SMC4-217ENST00000485867 CTXN2P0C2S0 81 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 DTYMKP23919 212 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 TALDO1P37837 337 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 NKX2-1P43699 371 aaPredicted RBP4.46□□□□□ -1.7
SMC4-217ENST00000485867 NPBWR1P48145 328 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 EIF2B2P49770 351 aaKnown RBP4.46□□□□□ -1.7
SMC4-217ENST00000485867 ST3GAL4Q11206 333 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 MSMO1Q15800 293 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 PIK3CD-AS1Q5SR53 167 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 C16orf54Q6UWD8 224 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 ZNF114Q8NC26 417 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 OR10R2Q8NGX6 335 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 PINX1Q96BK5 328 aaKnown RBP4.46□□□□□ -1.7
SMC4-217ENST00000485867 FAM3DQ96BQ1 224 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 RNF125Q96EQ8 232 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 TMEM80Q96HE8 168 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 NARS2Q96I59 477 aaKnown RBP4.46□□□□□ -1.7
SMC4-217ENST00000485867 TMEM56Q96MV1 263 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 MAGT1Q9H0U3 335 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 SLC35B3Q9H1N7 401 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 PLEKHA2Q9HB19 425 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 CCL28Q9NRJ3 127 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 COMMD9Q9P000 198 aa4.46□□□□□ -1.7
SMC4-217ENST00000485867 ELF5Q9UKW6 265 aaPredicted RBP4.46□□□□□ -1.7
SMC4-217ENST00000485867 LOC100130705A0A1B0GUX0 176 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 TMEM50AO95807 157 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 SCGB1D2O95969 90 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 PRM2P04554 102 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 UCHL1P09936 223 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 GADD45AP24522 165 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 WNT4P56705 351 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 ERVK-16P61578 105 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 CATR1Q13166 79 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 FCN2Q15485 313 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 ZNF79Q15937 498 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 C2orf76Q3KRA6 126 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 MS4A15Q8N5U1 240 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 OR4C16Q8NGL9 310 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 OR51H1Q8NH63 302 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 RXFP4Q8TDU9 374 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 SECTM1Q8WVN6 248 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 RBM38Q9H0Z9 239 aaKnown RBP4.45□□□□□ -1.7
SMC4-217ENST00000485867 SAV1Q9H4B6 383 aaPredicted RBP4.45□□□□□ -1.7
SMC4-217ENST00000485867 NRN1Q9NPD7 142 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 MED4Q9NPJ6 270 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 HEYLQ9NQ87 328 aaPredicted RBP4.45□□□□□ -1.7
SMC4-217ENST00000485867 RAB22AQ9UL26 194 aa4.45□□□□□ -1.7
SMC4-217ENST00000485867 AK6Q9Y3D8 172 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms