RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 H7C2Y5 167 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 SIVA1O15304 175 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 RBFOX2O43251 390 aaKnown RBP eCLIP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 GSTZ1O43708 216 aaPredicted RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 NDUFA3O95167 84 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 TSPAN13O95857 204 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 PPYP01298 95 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 IGHG2P01859 326 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 PTHLHP12272 177 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 NFYAP23511 347 aaPredicted RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 CD24P25063 80 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 ETV6P41212 452 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 NDUFV3P56181 108 aaKnown RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 TAS2R19P59542 299 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 BLCAPP62952 87 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 MMDQ15546 238 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 RTL8BQ17RB0 113 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 ABCA11PQ4W5N1 156 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 RPL39P5Q59GN2 51 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 ZNF660Q6AZW8 331 aaPredicted RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 SNX29P2Q8IUI4 249 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 ARRDC1Q8N5I2 433 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 FAM71E2Q8N5Q1 922 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 TCTEX1D1Q8N7M0 179 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 Q8N9W7 124 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 TMEM229BQ8NBD8 167 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 OR5H2Q8NGV7 314 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 C11orf45Q8TAV5 145 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 SMIM4Q8WVI0 70 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 FLYWCH2Q96CP2 140 aaKnown RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 RBMXL1Q96E39 390 aaKnown RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 TSNAXQ99598 290 aaKnown RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 RASL11BQ9BPW5 248 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 MRPL20Q9BYC9 149 aaKnown RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 OR2D2Q9H210 308 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 ZC4H2Q9NQZ6 224 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 RBMX2Q9Y388 322 aaKnown RBP4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 PRELID3BQ9Y3B1 194 aa4.25□□□□□ -1.73
NHLRC3-205ENST00000485407 IGKV1D-13A0A0B4J2D9 117 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 E9PLD3 99 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 K7EQG2 157 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 M0R1X1 148 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 HLA-DRB1P01911 266 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 CD74P04233 296 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 IFNA6P05013 189 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 IGKV1-13P0DP09 117 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 HLA-DMAP28067 261 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 S100GP29377 79 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 HRH1P35367 487 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 KIR2DS2P43631 304 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 VDAC2P45880 294 aaPredicted RBP4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 LINC00205P59089 165 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 TSPAN5P62079 268 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 CATR1Q13166 79 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 EIF4EBP1Q13541 118 aaPredicted RBP4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 C5orf64Q2M2E5 130 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 RNASE10Q5GAN6 216 aaKnown RBP4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 FAM131AQ6UXB0 335 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 CMTM1Q8IZ96 169 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 INO80EQ8NBZ0 244 aaPredicted RBP4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 OR52E5Q8NH55 327 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 VSTM2AQ8TAG5 236 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 SEC22AQ96IW7 307 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 ZNF2Q9BSG1 426 aaPredicted RBP4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 DCUN1D5Q9BTE7 237 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 BATF3Q9NR55 127 aa4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 TET2Q6N021 2002 aaPredicted RBP4.24□□□□□ -1.73
NHLRC3-205ENST00000485407 MEIS3P1A6NDR6 274 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 GPR31O00270 319 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 SOX15O60248 233 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 CREBL2O60519 120 aaPredicted RBP4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 RAB3DO95716 219 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 PMP2P02689 132 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 IGKV1-16P04430 117 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 SLC6A1P30531 599 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 GNRHRP30968 328 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 CRIP2P52943 208 aaPredicted RBP4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 AP3S2P59780 193 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 UBE2KP61086 200 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 SLC35B1P78383 322 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 TMEM267Q0VDI3 215 aaPredicted RBP4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 PSG5Q15238 335 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 SURF2Q15527 256 aaPredicted RBP4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 VMA21Q3ZAQ7 101 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 SLC35E3Q7Z769 313 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 LHFPL1Q86WI0 220 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 GDPD1Q8N9F7 314 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 OR6Q1Q8NGQ2 317 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 OR4S2Q8NH73 311 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 TERB2Q8NHR7 220 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 HINT2Q9BX68 163 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 MFFQ9GZY8 342 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 CCL28Q9NRJ3 127 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 RNF24Q9Y225 148 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
NHLRC3-205ENST00000485407 IGHV3OR16-12A0A075B7B8 117 aa4.22□□□□□ -1.73
NHLRC3-205ENST00000485407 TRBV9A0A0B4J1U6 114 aa4.22□□□□□ -1.73
NHLRC3-205ENST00000485407 IGHV7-81A0A0B4J1V7 117 aa4.22□□□□□ -1.73
NHLRC3-205ENST00000485407 LOC100131303A0A0U1RQF7 123 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms