RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 MYO3BQ8WXR4 1341 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 PTPRFP10586 1907 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 LOC110117498A0A087WWA1 95 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 TRAV1-1A0A0B4J248 108 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 hADV38S2A0JD32 116 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 C7orf71A4D174 169 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 C2orf70A6NJV1 201 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 J3QRK9 145 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 PROSCO94903 275 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 CNIH1O95406 144 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 RPS17P08708 135 aaKnown RBP0.39□□□□□ -2.35
SCAF11-207ENST00000484275 CRYGAP11844 174 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 AP3S2P59780 193 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 RPS20P60866 119 aaKnown RBP0.39□□□□□ -2.35
SCAF11-207ENST00000484275 RAB4BP61018 213 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 HIST1H3AP68431 136 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 H3F3AP84243 136 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 IAH1Q2TAA2 248 aaPredicted RBP0.39□□□□□ -2.35
SCAF11-207ENST00000484275 BPIFA4PQ86YQ2 179 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 LINC00311Q8N616 119 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 GDPD1Q8N9F7 314 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 OR10J5Q8NHC4 309 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 CT55Q8WUE5 264 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 ITFG2Q969R8 447 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 GPR146Q96CH1 333 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 C8orf76Q96K31 380 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 C2orf50Q96LR7 162 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 TRIM4Q9C037 500 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 CCDC90BQ9GZT6 254 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 DCSTAMPQ9H295 470 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 RNF122Q9H9V4 155 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 RASL12Q9NYN1 266 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 EPDR1Q9UM22 224 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 CYSLTR1Q9Y271 337 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 HS3ST2Q9Y278 367 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 C22orf24Q9Y442 160 aa0.39□□□□□ -2.35
SCAF11-207ENST00000484275 PCF11O94913 1555 aaKnown RBP0.39□□□□□ -2.35
SCAF11-207ENST00000484275 N4BP2Q86UW6 1770 aaPredicted RBP0.39□□□□□ -2.35
SCAF11-207ENST00000484275 ZFC3H1O60293 1989 aaKnown RBP0.39□□□□□ -2.35
SCAF11-207ENST00000484275 TRPM1Q7Z4N2 1603 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 PHRF1Q9P1Y6 1649 aaKnown RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 SCN8AQ9UQD0 1980 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 NCAPD3P42695 1498 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 A0A087X0T9 212 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 TRBV6-7A0A0A0MS04 114 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 TRAV12-1A0A0B4J245 112 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 IGKV1-9A0A0C4DH69 117 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 FAM236DA0A1B0GTK5 79 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 SMIM9A6NGZ8 99 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 M0R2N4 97 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 UBL3O95164 117 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 LYPLA2O95372 231 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 C8GP07360 202 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 OR4E1P0C645 316 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 FAM236CP0DP71 79 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 PPIBP23284 216 aaKnown RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 CASP1P29466 404 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 CDKN2CP42773 168 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 SSR2P43308 183 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 LSM6P62312 80 aaKnown RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 RANP62826 216 aaKnown RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 CTAG1AP78358 180 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 AESQ08117 197 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 SRSF6Q13247 344 aaKnown RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 TSNQ15631 228 aaKnown RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 C12orf74Q32Q52 190 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 LINC01554Q52M75 96 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 TMEM97Q5BJF2 176 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 OOSP2Q86WS3 158 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 FAM19A2Q8N3H0 131 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 MNS1Q8NEH6 495 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 TEX47Q8TBZ9 253 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 ZNF418Q8TF45 676 aaPredicted RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 SFT2D1Q8WV19 159 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 C4orf3Q8WVX3 66 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 TLNRD1Q9H1K6 362 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 OSTCQ9NRP0 149 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 SLC22A13Q9Y226 551 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 SLC35A3Q9Y2D2 325 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 CHD3Q12873 2000 aaKnown RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 CCDC144AA2RUR9 1427 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 KDM6AO15550 1401 aaPredicted RBP0.38□□□□□ -2.35
SCAF11-207ENST00000484275 TNS3Q68CZ2 1445 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 FMN1Q68DA7 1419 aa0.38□□□□□ -2.35
SCAF11-207ENST00000484275 NCOA6Q14686 2063 aaPredicted RBP0.37□□□□□ -2.35
SCAF11-207ENST00000484275 DOCK4Q8N1I0 1966 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 ANKRD31Q8N7Z5 1873 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 MYH3P11055 1940 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.37□□□□□ -2.35
SCAF11-207ENST00000484275 hCG_1818297A0A087WSY0 165 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 A8MT66 165 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 SULT1B1O43704 296 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 PDE6DO43924 150 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 LYZL6O75951 148 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 ZNF682O95780 498 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 HAND1O96004 215 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 TCRBP04435 133 aa0.37□□□□□ -2.35
SCAF11-207ENST00000484275 MGST1P10620 155 aaKnown RBP0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms