RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 PSMB11A5LHX3 300 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 ZFP92A6NM28 416 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 K7EIM0 57 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 CLN5O75503 358 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 OR2J3O76001 311 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 IGLV1-40P01703 118 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 IGHG4P01861 327 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 TRGV3P03979 118 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 S100A7P31151 101 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 RPL29P47914 159 aaKnown RBP10.92□□□□□ -0.66
SMAD9-204ENST00000483941 RND2P52198 227 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 C15orf32Q32M92 178 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 Q6ZRG5 221 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 S100A7AQ86SG5 101 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 THAP8Q8NA92 274 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 TMED6Q8WW62 240 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 NPIPB3Q92617 1050 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 TRGV9Q99603 122 aa10.92□□□□□ -0.66
SMAD9-204ENST00000483941 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
SMAD9-204ENST00000483941 GNG7O60262 68 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 NDUFA7O95182 113 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 TSPAN15O95858 294 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 PRH1P02810 166 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 PF4V1P10720 104 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 TPPP2P59282 170 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 CFHR3Q02985 330 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 FOXE3Q13461 319 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 Q56UQ5 140 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 AWAT1Q58HT5 328 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 PXDC1Q5TGL8 231 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 ALKAL2Q6UX46 152 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 NOL4LQ96MY1 436 aaPredicted RBP10.91□□□□□ -0.66
SMAD9-204ENST00000483941 C16orf95Q9H693 158 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 ESM1Q9NQ30 184 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 DMRT1Q9Y5R6 373 aa10.91□□□□□ -0.66
SMAD9-204ENST00000483941 TCRBV4S1A1TA0A5B7 111 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 AGPAT2O15120 278 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 NDUFB8O95169 186 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 OR10J1P30954 320 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 RAB9AP51151 201 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 BLOC1S1P78537 153 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 IFITM2Q01629 132 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 MLANAQ16655 118 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 ACOT6Q3I5F7 207 aaPredicted RBP10.9□□□□□ -0.66
SMAD9-204ENST00000483941 SPSB3Q6PJ21 355 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 Q6ZS46 218 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 Q6ZSV7 163 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 OR4F5Q8NH21 305 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 SAT2Q96F10 170 aaPredicted RBP10.9□□□□□ -0.66
SMAD9-204ENST00000483941 MS4A10Q96PG2 267 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 LINC00527Q9UJ94 153 aa10.9□□□□□ -0.66
SMAD9-204ENST00000483941 TEX46H3BTG2 121 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 NUPL2O15504 423 aaKnown RBP10.89□□□□□ -0.67
SMAD9-204ENST00000483941 SULT1A2P50226 295 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 RAB2AP61019 212 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 YPEL3P61236 119 aaPredicted RBP10.89□□□□□ -0.67
SMAD9-204ENST00000483941 B2MP61769 119 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 RUNX1Q01196 453 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 C19orf35Q6ZS72 473 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 CYP2G1PQ6ZSU1 146 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 BPIFCQ8NFQ6 507 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 RNF2Q99496 336 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 MGST2Q99735 147 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 GGTLC1Q9BX51 225 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 SLC45A2Q9UMX9 530 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
SMAD9-204ENST00000483941 A0A1B0GUS0 222 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 PSMB8P28062 276 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 TMEM41BQ5BJD5 291 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 FFAR4Q5NUL3 377 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-204ENST00000483941 OR4X2Q8NGF9 303 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 OR1L4Q8NGR5 311 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 ZNF502Q8TBZ5 544 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 Q8WTZ3 238 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 PFDN5Q99471 154 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 SERTAD4Q9NUC0 356 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 SLC39A9Q9NUM3 307 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 PXMP4Q9Y6I8 212 aa10.88□□□□□ -0.67
SMAD9-204ENST00000483941 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-204ENST00000483941 IGHV3-21A0A0B4J1V1 117 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 ZNF705EA8MWA4 302 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-204ENST00000483941 IGLC1P0CG04 106 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 RD3LP0DJH9 198 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 M6PRP20645 277 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 RELQ04864 619 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-204ENST00000483941 ZNF616Q08AN1 781 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 SHISA2Q6UWI4 295 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 STPG3Q8N7X2 389 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 RNF152Q8N8N0 203 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 WFDC12Q8WWY7 111 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 ZNF747Q9BV97 191 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 SH3BGRL3Q9H299 93 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 PFDN2Q9UHV9 154 aa10.87□□□□□ -0.67
SMAD9-204ENST00000483941 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 A0A1W2PPV4 95 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 IGHV3-48P01763 117 aa10.86□□□□□ -0.67
SMAD9-204ENST00000483941 CLEC3BP05452 202 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms