RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-225ENST00000483506 YPEL3P61236 119 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-225ENST00000483506 MZT2BQ6NZ67 158 aa13.49□□□□□ -0.25
HDAC6-225ENST00000483506 SBSPONQ8IVN8 264 aa13.49□□□□□ -0.25
HDAC6-225ENST00000483506 RHPN1-AS1Q9BWJ2 59 aa13.49□□□□□ -0.25
HDAC6-225ENST00000483506 VSIRQ9H7M9 311 aa13.49□□□□□ -0.25
HDAC6-225ENST00000483506 SELENOKQ9Y6D0 94 aa13.49□□□□□ -0.25
HDAC6-225ENST00000483506 TRAV6A0A075B6T7 132 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 FAM240BA0A1B0GVZ2 78 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 IFNA4P05014 189 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 IAPPP10997 89 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 OR10J1P30954 320 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 IFITM3Q01628 133 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 TIGITQ495A1 244 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 LAMTOR1Q6IAA8 161 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 LINC00322Q6ZN03 302 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-225ENST00000483506 ASCL2Q99929 193 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 MAGT1Q9H0U3 335 aa13.48□□□□□ -0.25
HDAC6-225ENST00000483506 H2AFB2P0C5Z0 115 aa13.47□□□□□ -0.25
HDAC6-225ENST00000483506 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-225ENST00000483506 RAB11AP62491 216 aa13.47□□□□□ -0.25
HDAC6-225ENST00000483506 RPP30P78346 268 aaKnown RBP13.47□□□□□ -0.25
HDAC6-225ENST00000483506 ZNF431Q8TF32 576 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-225ENST00000483506 NPIPB3Q92617 1050 aa13.47□□□□□ -0.25
HDAC6-225ENST00000483506 RNF2Q99496 336 aa13.47□□□□□ -0.25
HDAC6-225ENST00000483506 PRSS46E5RG02 174 aa13.46□□□□□ -0.25
HDAC6-225ENST00000483506 CD5P06127 495 aa13.46□□□□□ -0.25
HDAC6-225ENST00000483506 CRYBB3P26998 211 aa13.46□□□□□ -0.25
HDAC6-225ENST00000483506 BMI1P35226 326 aa13.46□□□□□ -0.25
HDAC6-225ENST00000483506 FAM90A2PQ658T7 463 aa13.46□□□□□ -0.25
HDAC6-225ENST00000483506 TM2D3Q9BRN9 247 aa13.46□□□□□ -0.25
HDAC6-225ENST00000483506 U3KQK5 164 aa13.46□□□□□ -0.25
HDAC6-225ENST00000483506 TENM3Q9P273 2699 aa13.46□□□□□ -0.26
HDAC6-225ENST00000483506 OR11H12B2RN74 326 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 WRBO00258 174 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 GAMTQ14353 236 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 IAH1Q2TAA2 248 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-225ENST00000483506 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
HDAC6-225ENST00000483506 ST8SIA2Q92186 375 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 ACY3Q96HD9 319 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 FAM110AQ9BQ89 295 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 SEC22CQ9BRL7 303 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 WFDC10AQ9H1F0 79 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 TUBA4BQ9H853 241 aa13.45□□□□□ -0.26
HDAC6-225ENST00000483506 IGHV3-49A0A0A0MS15 119 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 TOMM40O96008 361 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 APOHP02749 345 aaPredicted RBP13.44□□□□□ -0.26
HDAC6-225ENST00000483506 IL5P05113 134 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 NPPCP23582 126 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 POLR2GP62487 172 aaKnown RBP eCLIP13.44□□□□□ -0.26
HDAC6-225ENST00000483506 DEFB125Q8N687 156 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 Q8WTZ3 238 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 SLC35E1Q96K37 410 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 METTL26Q96S19 204 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 U3KQE9 123 aa13.44□□□□□ -0.26
HDAC6-225ENST00000483506 IGKV1D-37A0A075B6S9 117 aa13.43□□□□□ -0.26
HDAC6-225ENST00000483506 OR4C46A6NHA9 309 aa13.43□□□□□ -0.26
HDAC6-225ENST00000483506 HAGHQ16775 308 aa13.43□□□□□ -0.26
HDAC6-225ENST00000483506 ENKURQ8TC29 256 aa13.43□□□□□ -0.26
HDAC6-225ENST00000483506 SMIM8Q96KF7 97 aa13.43□□□□□ -0.26
HDAC6-225ENST00000483506 TMEM231Q9H6L2 316 aa13.43□□□□□ -0.26
HDAC6-225ENST00000483506 SRD5A3Q9H8P0 318 aa13.43□□□□□ -0.26
HDAC6-225ENST00000483506 IGHV3OR16-13A0A075B7E8 117 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 IGHV3-74A0A0B4J1X5 117 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 A0A1W2PS18 150 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 RBMY1BA6NDE4 496 aaKnown RBP13.42□□□□□ -0.26
HDAC6-225ENST00000483506 RBMY1EA6NEQ0 496 aaKnown RBP13.42□□□□□ -0.26
HDAC6-225ENST00000483506 SSSCA1O60232 199 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 RBMY1DP0C7P1 496 aaKnown RBP13.42□□□□□ -0.26
HDAC6-225ENST00000483506 SPANXN5Q5MJ07 72 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 LILRB2Q8N423 598 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 C12orf45Q8N5I9 185 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-225ENST00000483506 THAP8Q8NA92 274 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
HDAC6-225ENST00000483506 RCL1Q9Y2P8 373 aaKnown RBP13.42□□□□□ -0.26
HDAC6-225ENST00000483506 STRAPQ9Y3F4 350 aaKnown RBP13.42□□□□□ -0.26
HDAC6-225ENST00000483506 TRAV2A0A0B4J234 112 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 RD3LP0DJH9 198 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 PSG1P11464 419 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 PAX9P55771 341 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 TAS2R30P59541 319 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 ODF3L2Q3SX64 289 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 TCF24Q7RTU0 167 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 NRARPQ7Z6K4 114 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 TRGV9Q99603 122 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 ZMAT4Q9H898 229 aa13.41□□□□□ -0.26
HDAC6-225ENST00000483506 IGKV1OR2-108A0A075B7D4 117 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 PMS2P5A8MQ11 134 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 H3BP45 60 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 CCSO14618 274 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 TSC22D2O75157 780 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 MBPP02686 304 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-225ENST00000483506 IL4P05112 153 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 HNRNPCP07910 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC6-225ENST00000483506 USF2Q15853 346 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-225ENST00000483506 TMEM14EPQ6UXP3 125 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 PSENENQ9NZ42 101 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 GSKIPQ9P0R6 139 aa13.4□□□□□ -0.26
HDAC6-225ENST00000483506 PAIP2BQ9ULR5 123 aaKnown RBP13.4□□□□□ -0.26
HDAC6-225ENST00000483506 DNAH7Q8WXX0 4024 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms