RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 PSMG3Q9BT73 122 aaPredicted RBP6.4□□□□□ -1.38
USP4-210ENST00000483212 SLC25A32Q9H2D1 315 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 C21orf62Q9NYP8 219 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 SLC45A2Q9UMX9 530 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 S4R3C0 116 aa6.4□□□□□ -1.38
USP4-210ENST00000483212 TCRBV4S1A1TA0A5B7 111 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 PSMB11A5LHX3 300 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 AGPAT2O15120 278 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 YIF1AO95070 293 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 IGKV1-17P01599 117 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 IGHV3-23P01764 117 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 TRGV3P03979 118 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 ELANEP08246 267 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 LINC00869P0C866 280 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 OR10J1P30954 320 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 RAB9AP51151 201 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 TPPP2P59282 170 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 AKR1C1Q04828 323 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 FOXE3Q13461 319 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 TCTEX1D4Q5JR98 221 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 FAM74A1Q5RGS3 127 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 ACSM6Q6P461 480 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 LCNL1Q6ZST4 164 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 LINC01006Q8NI28 216 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 SCGB1C1Q8TD33 95 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 CXorf58Q96LI9 332 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 ATP6V0BQ99437 205 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 TRGV9Q99603 122 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 TXN2Q99757 166 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 KRTAP4-7Q9BYR0 210 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 ZNF355PQ9NSJ1 428 aa6.39□□□□□ -1.39
USP4-210ENST00000483212 TEP1Q99973 2627 aaKnown RBP6.38□□□□□ -1.39
USP4-210ENST00000483212 CRYBA1P05813 215 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 CTSGP08311 255 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 PF4V1P10720 104 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 ADMP35318 185 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 RPL29P47914 159 aaKnown RBP6.38□□□□□ -1.39
USP4-210ENST00000483212 NPBWR1P48145 328 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 CAMLGP49069 296 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 SULT1A2P50226 295 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 MFAP4P55083 255 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 PROK1P58294 105 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 SLC35B1P78383 322 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 ZNF90Q03938 601 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 ATP5G2Q06055 141 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 MIC13Q5XKP0 118 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 ZNF343Q6P1L6 599 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 TEX38Q6PEX7 206 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 CYP2G1PQ6ZSU1 146 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 ZNF767PQ75MW2 155 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 KLHDC1Q8N7A1 406 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 EEF1AKMT3Q96AZ1 226 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 USMG5Q96IX5 58 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 VSIRQ9H7M9 311 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 PXMP4Q9Y6I8 212 aa6.38□□□□□ -1.39
USP4-210ENST00000483212 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.37□□□□□ -1.39
USP4-210ENST00000483212 TRBV7-1A0A0A6YYK4 115 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 ZFP92A6NM28 416 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 C17orf112F2Z3M2 114 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 IFNA7P01567 189 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 TRBV12-3P01733 135 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 RPLP1P05386 114 aaKnown RBP6.37□□□□□ -1.39
USP4-210ENST00000483212 GATA2P23769 480 aaPredicted RBP6.37□□□□□ -1.39
USP4-210ENST00000483212 YPEL3P61236 119 aaPredicted RBP6.37□□□□□ -1.39
USP4-210ENST00000483212 SERF2P84101 59 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 TIGITQ495A1 244 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 EIF5AL1Q6IS14 154 aaKnown RBP6.37□□□□□ -1.39
USP4-210ENST00000483212 COMMD1Q8N668 190 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 STPG3Q8N7X2 389 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 ZNF491Q8N8L2 437 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 BPIFCQ8NFQ6 507 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 CHRDL1Q9BU40 450 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 SLC39A9Q9NUM3 307 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 UBQLN2Q9UHD9 624 aa6.37□□□□□ -1.39
USP4-210ENST00000483212 TRAV30A0A087WSZ9 112 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 A0A0G2JLM5 398 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 CLPSL1A2RUU4 121 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 OR2T8A6NH00 312 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 TGOLN2O43493 480 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 GNG7O60262 68 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 TOMM40O96008 361 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 IGHV3-11P01762 117 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 CLEC3BP05452 202 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 NMBP08949 121 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 PSG1P11464 419 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 GPR183P32249 361 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
USP4-210ENST00000483212 PLP1P60201 277 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 RAB2AP61019 212 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 B2MP61769 119 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 SELENOTP62341 195 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 ZNF726P1Q15940 193 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 Q56UQ5 140 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 GCSAMLQ5JQS6 135 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 FFAR4Q5NUL3 377 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 CLEC19AQ6UXS0 136 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 PATE2Q6UY27 113 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 OR5AU1Q8NGC0 362 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 OR4F5Q8NH21 305 aa6.36□□□□□ -1.39
USP4-210ENST00000483212 UBE2E2Q96LR5 201 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms