RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 LDLRAD2Q5SZI1 272 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 PERPQ96FX8 193 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 IGHV3OR16-8A0A075B7F1 116 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.33□□□□□ -0.92
SMPD4-218ENST00000482171 NBL1P41271 181 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 NIT1Q86X76 327 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 C5orf17Q8NAS9 161 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 NEU1Q99519 415 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 IGHV3OR16-13A0A075B7E8 117 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 IGHV3-74A0A0B4J1X5 117 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 C8orf88P0DMB2 117 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
SMPD4-218ENST00000482171 LINC00473A8K010 186 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 COX6B1P14854 86 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 RIGQ13278 110 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 Q6ZRM9 215 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 PRNTQ86SH4 94 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 ZNF672Q499Z4 452 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-218ENST00000482171 DUX4L9Q6RFH8 374 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-218ENST00000482171 PMCHL2Q9BQD1 86 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 ZNF430Q9H8G1 570 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-218ENST00000482171 PLA2G2EQ9NZK7 142 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 POLR3KQ9Y2Y1 108 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-218ENST00000482171 HLA-DRB1P01911 266 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 PFN1P07737 140 aaKnown RBP9.32□□□□□ -0.92
SMPD4-218ENST00000482171 MYOD1P15172 320 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 MEF2CQ06413 473 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-218ENST00000482171 IL15RAQ13261 267 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 FBLN7Q53RD9 439 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 TMEM177Q53S58 311 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 ACTL10Q5JWF8 245 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 OSR1Q8TAX0 266 aaPredicted RBP9.32□□□□□ -0.92
SMPD4-218ENST00000482171 DPM3Q9P2X0 92 aa9.32□□□□□ -0.92
SMPD4-218ENST00000482171 IGKV1D-33P01593 117 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 IGKV1-33P01594 117 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 TMEM97Q5BJF2 176 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 TRAV3A0A0B4J244 114 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 ZNF324O75467 553 aaPredicted RBP9.31□□□□□ -0.92
SMPD4-218ENST00000482171 CA1P00915 261 aaPredicted RBP9.31□□□□□ -0.92
SMPD4-218ENST00000482171 IGLV3-1P01715 115 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 IGHV3-23P01764 117 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 LINC00614P0C842 121 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 PRR31Q5SQ13 230 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 LCN12Q6JVE5 192 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 LYPD2Q6UXB3 125 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 Q6ZS49 121 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
SMPD4-218ENST00000482171 MYO9AB2RTY4 2548 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 TLN2Q9Y4G6 2542 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 FAM106CPP0CH98 169 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 GNLYP22749 145 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 DLX1P56177 255 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 SAPCD1Q5SSQ6 148 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 IGFL3Q6UXB1 125 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 MIR17HGQ75NE6 70 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 RPUSD1Q9UJJ7 312 aaKnown RBP9.31□□□□□ -0.92
SMPD4-218ENST00000482171 HIGD1AQ9Y241 93 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 GOSR1O95249 250 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 GCSHP23434 173 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 OR10W1Q8NGF6 305 aa9.31□□□□□ -0.92
SMPD4-218ENST00000482171 ZNF788Q6ZQV5 615 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 F11RQ9Y624 299 aaKnown RBP9.3□□□□□ -0.92
SMPD4-218ENST00000482171 TNCP24821 2201 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 TMEM178BH3BS89 294 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 CIDEAO60543 219 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 PF4V1P10720 104 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 S100A4P26447 101 aaKnown RBP9.3□□□□□ -0.92
SMPD4-218ENST00000482171 PET117Q6UWS5 81 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 CCL19Q99731 98 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 E7EQL1 145 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 SCGB1C2P0DMR2 95 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 FCGR2BP31994 310 aaPredicted RBP9.3□□□□□ -0.92
SMPD4-218ENST00000482171 STXBP6Q8NFX7 210 aa9.3□□□□□ -0.92
SMPD4-218ENST00000482171 PRB4P10163 310 aaPredicted RBP9.29□□□□□ -0.92
SMPD4-218ENST00000482171 TMEM200BQ69YZ2 307 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 FGF23Q9GZV9 251 aaPredicted RBP9.29□□□□□ -0.92
SMPD4-218ENST00000482171 TMEM133Q9H2Q1 129 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 PEF1Q9UBV8 284 aaKnown RBP9.29□□□□□ -0.92
SMPD4-218ENST00000482171 IGHV3-49A0A0A0MS15 119 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 C10orf142B7Z368 130 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 FABP2P12104 132 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 SELENOTP62341 195 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 WFDC3Q8IUB2 231 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 RNASEH2CQ8TDP1 164 aaKnown RBP9.29□□□□□ -0.92
SMPD4-218ENST00000482171 CHD3Q12873 2000 aaKnown RBP9.29□□□□□ -0.92
SMPD4-218ENST00000482171 ZFYVE26Q68DK2 2539 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 FOXL1Q12952 345 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 TMEM30BQ3MIR4 351 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.29□□□□□ -0.92
SMPD4-218ENST00000482171 OR4A5Q8NH83 315 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 ABCA2Q9BZC7 2435 aa9.29□□□□□ -0.92
SMPD4-218ENST00000482171 COL8A2P25067 703 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 NEU4Q8WWR8 484 aaPredicted RBP9.28□□□□□ -0.92
SMPD4-218ENST00000482171 IFI27L2Q9H2X8 130 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 PDLIM4P50479 330 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 LYPD6BQ8NI32 183 aa9.28□□□□□ -0.92
SMPD4-218ENST00000482171 GAFA1Q96PS6 74 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms