RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SAV1Q9H4B6 383 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-224ENST00000481929 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-224ENST00000481929 TRDV1A0A1B0GX56 115 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 LYRM9A8MSI8 78 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 CBX5P45973 191 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 DHRS11Q6UWP2 260 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 Q8WTZ3 238 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 DUSP21Q9H596 190 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 SCPEP1Q9HB40 452 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 FAM212BQ9NTI7 297 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-224ENST00000481929 PGPEP1Q9NXJ5 209 aa10.42□□□□□ -0.74
HDAC6-224ENST00000481929 INS-IGF2F8WCM5 200 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 GSTZ1O43708 216 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-224ENST00000481929 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 RNASE2P10153 161 aaKnown RBP10.41□□□□□ -0.74
HDAC6-224ENST00000481929 PSG9Q00887 426 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 USF2Q15853 346 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-224ENST00000481929 RNF141Q8WVD5 230 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 MRGPRFQ96AM1 343 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 LINC00052Q96N35 136 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 TMEM208Q9BTX3 173 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 FXYD6Q9H0Q3 95 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 IFT46Q9NQC8 304 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 NDUFB11Q9NX14 153 aa10.41□□□□□ -0.74
HDAC6-224ENST00000481929 A0A1W2PPQ1 181 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 MEIS3P1A6NDR6 274 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 M0QYG6 137 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 IGKV1-39P01597 117 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 IGKV1D-39P04432 117 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 ATP5G1P05496 136 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 S100GP29377 79 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 RPL5P46777 297 aaKnown RBP10.4□□□□□ -0.74
HDAC6-224ENST00000481929 ATP5G3P48201 142 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 RFX2P48378 723 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 RORCP51449 518 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 ZNF79Q15937 498 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 MLANAQ16655 118 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 PHLDA2Q53GA4 152 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 SPATA31B1PQ5VZV4 182 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 PRSS48Q7RTY5 328 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 OR1S2Q8NGQ3 325 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 OR6F1Q8NGZ6 308 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 COQ8AQ8NI60 647 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 AUNIPQ9H7T9 357 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 MDFICQ9P1T7 246 aa10.4□□□□□ -0.74
HDAC6-224ENST00000481929 BUB3O43684 328 aa10.39□□□□□ -0.75
HDAC6-224ENST00000481929 IL4P05112 153 aa10.39□□□□□ -0.75
HDAC6-224ENST00000481929 IGLC1P0CG04 106 aa10.39□□□□□ -0.75
HDAC6-224ENST00000481929 ID1P41134 155 aa10.39□□□□□ -0.75
HDAC6-224ENST00000481929 DHODHQ02127 395 aa10.39□□□□□ -0.75
HDAC6-224ENST00000481929 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
HDAC6-224ENST00000481929 RRP15Q9Y3B9 282 aaKnown RBP10.39□□□□□ -0.75
HDAC6-224ENST00000481929 A0A0A6YYH2 397 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 A6NJ64 397 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 EREGO14944 169 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 SMR3BP02814 79 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-224ENST00000481929 YPEL3P61236 119 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-224ENST00000481929 IZUMO4Q1ZYL8 232 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 EBLN2Q6P2I7 272 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 SFXN4Q6P4A7 337 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 TBC1D26Q86UD7 250 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 OR4C16Q8NGL9 310 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 SLC25A38Q96DW6 304 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 C17orf77Q96MU5 243 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 PDCD10Q9BUL8 212 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 VCXQ9H320 206 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 ENY2Q9NPA8 101 aa10.38□□□□□ -0.75
HDAC6-224ENST00000481929 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 PMP2P02689 132 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 OR10J1P30954 320 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDAC6-224ENST00000481929 PSMB3P49720 205 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 TBCEQ15813 527 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-224ENST00000481929 FAM78BQ5VT40 261 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 Q6ZSN1 163 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 OR5H2Q8NGV7 314 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 IGF2BP2-AS1Q96M15 143 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 DIABLOQ9NR28 239 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
HDAC6-224ENST00000481929 ZNF705GA8MUZ8 300 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-224ENST00000481929 NUP62P37198 522 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-224ENST00000481929 RND2P52198 227 aa10.36□□□□□ -0.75
HDAC6-224ENST00000481929 PAX9P55771 341 aa10.36□□□□□ -0.75
HDAC6-224ENST00000481929 LPCAT3Q6P1A2 487 aa10.36□□□□□ -0.75
HDAC6-224ENST00000481929 OR5H6Q8NGV6 325 aa10.36□□□□□ -0.75
HDAC6-224ENST00000481929 UPK3BQ9BT76 320 aa10.36□□□□□ -0.75
HDAC6-224ENST00000481929 WDR12Q9GZL7 423 aaKnown RBP10.36□□□□□ -0.75
HDAC6-224ENST00000481929 A0A0J9YX75 114 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 CBY3A6NI87 242 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 F6UB75 175 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 IFNA5P01569 189 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 ETV6P41212 452 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 HSPA13P48723 471 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 SCAND1P57086 179 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 LINC00315P59091 139 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 TAS2R46P59540 309 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 ERVFC1-1P60608 527 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 ICAM4Q14773 271 aa10.35□□□□□ -0.75
HDAC6-224ENST00000481929 UHRF2Q96PU4 802 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms