RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 I3L521 148 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 NTF3P20783 257 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 LCA10Q71F78 164 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 ZNF695Q8IW36 515 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 RHOXF1Q8NHV9 184 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 LINC00479Q96M42 142 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 AP1S3Q96PC3 154 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 MRPL16Q9NX20 251 aaKnown RBP5.64□□□□□ -1.51
LSM5-210ENST00000480956 HS3ST2Q9Y278 367 aa5.64□□□□□ -1.51
LSM5-210ENST00000480956 MAST2Q6P0Q8 1798 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 NRASP01111 189 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST1H2BOP23527 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 ATP6V0CP27449 155 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST1H2BBP33778 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST1H2BDP58876 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST1H2BCP62807 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST2H2BEQ16778 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 RRN3P1Q2M238 152 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.63□□□□□ -1.51
LSM5-210ENST00000480956 TMEM69Q5SWH9 247 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 GLYATL3Q5SZD4 288 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 PACRGLQ8N7B6 248 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST1H2BHQ93079 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST1H2BNQ99877 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 HIST1H2BMQ99879 126 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 ZNF471Q9BX82 626 aaPredicted RBP5.63□□□□□ -1.51
LSM5-210ENST00000480956 C1QTNF6Q9BXI9 259 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 NAT8Q9UHE5 227 aa5.63□□□□□ -1.51
LSM5-210ENST00000480956 ZNFX1Q9P2E3 1918 aaKnown RBP5.63□□□□□ -1.51
LSM5-210ENST00000480956 IGHV3-43A0A0B4J1X8 118 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 IGKV1D-43A0A0B4J1Z2 117 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 A0A1B0GW54 56 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 C20orf202A1L168 122 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 IZUMO1RA6ND01 250 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 TLCD2A6NGC4 264 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 H7C423 109 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 J3QQQ9 107 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 TAX1BP3O14907 124 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 ZNF73O43830 326 aaPredicted RBP5.62□□□□□ -1.51
LSM5-210ENST00000480956 LYZL6O75951 148 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 ZNF678Q5SXM1 525 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 POM121L12Q8N7R1 296 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 OR5C1Q8NGR4 320 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 C1orf147Q96MC9 270 aaPredicted RBP5.62□□□□□ -1.51
LSM5-210ENST00000480956 TP73-AS1Q9UF72 201 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 FER1L6Q2WGJ9 1857 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 ZNF646O15015 1829 aaPredicted RBP5.62□□□□□ -1.51
LSM5-210ENST00000480956 NDUFAF8A1L188 74 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 GGCTO75223 188 aaKnown RBP5.62□□□□□ -1.51
LSM5-210ENST00000480956 PSG7Q13046 419 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 RPL22L1Q6P5R6 122 aaKnown RBP5.62□□□□□ -1.51
LSM5-210ENST00000480956 PCP2Q8IVA1 136 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 RNASE6Q93091 150 aaKnown RBP5.62□□□□□ -1.51
LSM5-210ENST00000480956 SLAMF6Q96DU3 332 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 B9D2Q9BPU9 175 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 TUBA4BQ9H853 241 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 OTORQ9NRC9 128 aa5.62□□□□□ -1.51
LSM5-210ENST00000480956 ARFGEF1Q9Y6D6 1849 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 TIAM2Q8IVF5 1701 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 LOXHD1Q8IVV2 1947 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 PVALEFA0A1B0GWK0 134 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 GIG44P09565 113 aaPredicted RBP5.61□□□□□ -1.51
LSM5-210ENST00000480956 TLX1NBP0CAT3 122 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 CXCL12P48061 93 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 ZNF80P51504 273 aaPredicted RBP5.61□□□□□ -1.51
LSM5-210ENST00000480956 RPL30P62888 115 aaKnown RBP5.61□□□□□ -1.51
LSM5-210ENST00000480956 SSX8Q7RTT4 187 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 DAND5Q8N907 189 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 ITLN2Q8WWU7 325 aaPredicted RBP5.61□□□□□ -1.51
LSM5-210ENST00000480956 PLA2G12AQ9BZM1 189 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 TNFSF18Q9UNG2 199 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 CELA1Q9UNI1 258 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 CDK5RAP2Q96SN8 1893 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 LAMA4Q16363 1823 aa5.61□□□□□ -1.51
LSM5-210ENST00000480956 RALGAPA2Q2PPJ7 1873 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 CFC1P0CG37 223 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 P0DMU3 169 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 FAM231AP0DMU4 169 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 FAM231CP0DMU5 169 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 CD28P10747 220 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 AZU1P20160 251 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 INSL3P51460 131 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 HMGA2P52926 109 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 CCL20P78556 96 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 BIKQ13323 160 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 OR8G1Q15617 311 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 VMA21Q3ZAQ7 101 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 C1orf140Q5VVS0 124 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 Q5XG85 94 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 SCIMPQ6UWF3 145 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 C15orf56Q8N910 161 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 Q8N976 141 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 FNDC9Q8TBE3 224 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 RPS4Y2Q8TD47 263 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 TMEM106AQ96A25 262 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 C21orf62Q9NYP8 219 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 NOTCH4Q99466 2003 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 KLF18A0A0U1RQI7 1052 aa5.6□□□□□ -1.51
LSM5-210ENST00000480956 K7ERS5 55 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms