RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 RSL24D1Q9UHA3 163 aaKnown RBP8.02□□□□□ -1.13
TTC28-206ENST00000480563 TMED3Q9Y3Q3 217 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 LRP1BQ9NZR2 4599 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 IGHV3OR16-12A0A075B7B8 117 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 TEX48A0A1B0GUV7 120 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 ZNF701M0R085 212 aaPredicted RBP8.01□□□□□ -1.13
TTC28-206ENST00000480563 HPGDSO60760 199 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 IGKV1-39P01597 117 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 PMP2P02689 132 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 IGKV1D-39P04432 117 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 AP2S1P53680 142 aaPredicted RBP8.01□□□□□ -1.13
TTC28-206ENST00000480563 FAM3BP58499 235 aaPredicted RBP8.01□□□□□ -1.13
TTC28-206ENST00000480563 SNRPD3P62318 126 aaKnown RBP8.01□□□□□ -1.13
TTC28-206ENST00000480563 SPCS2Q15005 226 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 MLANAQ16655 118 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 PHLDA2Q53GA4 152 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 TMEM88Q6PEY1 159 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 C6orf223Q8N319 242 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 OR6F1Q8NGZ6 308 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 FAM212BQ9NTI7 297 aaPredicted RBP8.01□□□□□ -1.13
TTC28-206ENST00000480563 NDUFA13Q9P0J0 144 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 RFNGQ9Y644 331 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 U3KQE9 123 aa8.01□□□□□ -1.13
TTC28-206ENST00000480563 APOBP04114 4563 aaKnown RBP8□□□□□ -1.13
TTC28-206ENST00000480563 FAM90A26D6RGX4 464 aa8□□□□□ -1.13
TTC28-206ENST00000480563 CORTO00230 105 aa8□□□□□ -1.13
TTC28-206ENST00000480563 PRSS3P35030 304 aa8□□□□□ -1.13
TTC28-206ENST00000480563 SUB1P53999 127 aaKnown RBP eCLIP8□□□□□ -1.13
TTC28-206ENST00000480563 OXA1LQ15070 435 aa8□□□□□ -1.13
TTC28-206ENST00000480563 TIGITQ495A1 244 aa8□□□□□ -1.13
TTC28-206ENST00000480563 C16orf54Q6UWD8 224 aa8□□□□□ -1.13
TTC28-206ENST00000480563 TBC1D26Q86UD7 250 aa8□□□□□ -1.13
TTC28-206ENST00000480563 OR4X1Q8NH49 305 aa8□□□□□ -1.13
TTC28-206ENST00000480563 GLMPQ8WWB7 406 aa8□□□□□ -1.13
TTC28-206ENST00000480563 MRGPRFQ96AM1 343 aa8□□□□□ -1.13
TTC28-206ENST00000480563 ATG101Q9BSB4 218 aa8□□□□□ -1.13
TTC28-206ENST00000480563 FXYD6Q9H0Q3 95 aa8□□□□□ -1.13
TTC28-206ENST00000480563 SCPEP1Q9HB40 452 aa8□□□□□ -1.13
TTC28-206ENST00000480563 RABL2AQ9UBK7 228 aaPredicted RBP8□□□□□ -1.13
TTC28-206ENST00000480563 EXTL2Q9UBQ6 330 aa8□□□□□ -1.13
TTC28-206ENST00000480563 RABL2BQ9UNT1 228 aa8□□□□□ -1.13
TTC28-206ENST00000480563 DMBT1Q9UGM3 2413 aaPredicted RBP7.99□□□□□ -1.13
TTC28-206ENST00000480563 NBDYA0A0U1RRE5 68 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 SCGB2A1O75556 95 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 IGKV1-17P01599 117 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 IGKV3-20P01619 116 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 RNASE2P10153 161 aaKnown RBP7.99□□□□□ -1.13
TTC28-206ENST00000480563 HLA-DRB4P13762 266 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 ELK1P19419 428 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 S100GP29377 79 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 FXYD7P58549 80 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 TAS2R46P59540 309 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 IZUMO4Q1ZYL8 232 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 SNX29P2Q8IUI4 249 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 MCFD2Q8NI22 146 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 DYNC2LI1Q8TCX1 351 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 FNDC4Q9H6D8 234 aaPredicted RBP7.99□□□□□ -1.13
TTC28-206ENST00000480563 SEPSECSQ9HD40 501 aaKnown RBP7.99□□□□□ -1.13
TTC28-206ENST00000480563 HLA-DRB4X5D2U9 266 aa7.99□□□□□ -1.13
TTC28-206ENST00000480563 NACAE9PAV3 2078 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 TRAV30A0A087WSZ9 112 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 INS-IGF2F8WCM5 200 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 HNRNPCP07910 306 aaKnown RBP eCLIP7.98□□□□□ -1.13
TTC28-206ENST00000480563 S100A5P33763 92 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 OPRK1P41145 380 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 MRPS10P82664 201 aaKnown RBP7.98□□□□□ -1.13
TTC28-206ENST00000480563 LPCAT3Q6P1A2 487 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 SPATA12Q7Z6I5 190 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 SLC35G3Q8N808 338 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 Q8WTZ3 238 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 NRN1Q9NPD7 142 aa7.98□□□□□ -1.13
TTC28-206ENST00000480563 DNAH5Q8TE73 4624 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 A0A0B4J293 547 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 NAT1P18440 290 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 RCVRNP35243 200 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 ETV6P41212 452 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
TTC28-206ENST00000480563 HOXA1P49639 335 aaPredicted RBP7.97□□□□□ -1.13
TTC28-206ENST00000480563 DEFB1P60022 68 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 GDF5OSQ5U4N7 250 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 C15orf53Q8NAA6 179 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 ZNRF2Q8NHG8 242 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 DIRAS2Q96HU8 199 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 ANAPC10Q9UM13 185 aa7.97□□□□□ -1.13
TTC28-206ENST00000480563 YTHDF2Q9Y5A9 579 aaKnown RBP7.97□□□□□ -1.13
TTC28-206ENST00000480563 LOC102723971A0A1B0GUV8 181 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 IGKV1-5P01602 117 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 HBE1P02100 147 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 HLA-DMAP28067 261 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 DAD1P61803 113 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 DHODHQ02127 395 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 IL18Q14116 193 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 GSG1LQ6UXU4 331 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 SIGLEC15Q6ZMC9 328 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 LYSMD2Q8IV50 215 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 PDCD10Q9BUL8 212 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 RBM38Q9H0Z9 239 aaKnown RBP7.96□□□□□ -1.14
TTC28-206ENST00000480563 GOLT1BQ9Y3E0 138 aa7.96□□□□□ -1.14
TTC28-206ENST00000480563 BUB3O43684 328 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms