RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 IGKV1-39P01597 117 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 IGKV1D-39P04432 117 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 IZUMO4Q1ZYL8 232 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 TIGITQ495A1 244 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 OGFRL1Q5TC84 451 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-211ENST00000479625 C22orf42Q6IC83 251 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 C1orf158Q8N1D5 194 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 OR4A16Q8NH70 328 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 TMEM230Q96A57 120 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 NARS2Q96I59 477 aaKnown RBP6.77□□□□□ -1.33
GPNMB-211ENST00000479625 FNDC4Q9H6D8 234 aaPredicted RBP6.77□□□□□ -1.33
GPNMB-211ENST00000479625 SCN3BQ9NY72 215 aa6.77□□□□□ -1.33
GPNMB-211ENST00000479625 TRAV18A0A075B6X5 111 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 CLN5O75503 358 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 IGKV1-17P01599 117 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 HBE1P02100 147 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 EIF2B2P49770 351 aaKnown RBP6.76□□□□□ -1.33
GPNMB-211ENST00000479625 SNRPD3P62318 126 aaKnown RBP6.76□□□□□ -1.33
GPNMB-211ENST00000479625 PHLDA2Q53GA4 152 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 CADM3Q8N126 398 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 OR5AP2Q8NGF4 316 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 FRZBQ92765 325 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 SLC25A38Q96DW6 304 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 SEC22AQ96IW7 307 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 C20orf173Q96LM9 149 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 TSC22D3Q99576 134 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 NRN1Q9NPD7 142 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 RHBDL2Q9NX52 303 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 EHFQ9NZC4 300 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 MDFICQ9P1T7 246 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 DAPK2Q9UIK4 370 aa6.76□□□□□ -1.33
GPNMB-211ENST00000479625 RGS10O43665 173 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 SCGNO76038 276 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 PRM2P04554 102 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 HNRNPCP07910 306 aaKnown RBP eCLIP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 RNASE2P10153 161 aaKnown RBP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 OPRK1P41145 380 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 HSPE1P61604 102 aaKnown RBP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 ERHP84090 104 aaKnown RBP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 USF2Q15853 346 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 SSX7Q7RTT5 188 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 H2BFWTQ7Z2G1 175 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 OR4B1Q8NGF8 309 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 OR5H6Q8NGV6 325 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 BORCS5Q969J3 196 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 MRGPRFQ96AM1 343 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 C7orf50Q9BRJ6 194 aaKnown RBP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 ZNF2Q9BSG1 426 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 SAV1Q9H4B6 383 aaPredicted RBP6.75□□□□□ -1.33
GPNMB-211ENST00000479625 DUSP21Q9H596 190 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 C8orf4Q9NR00 106 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 NDUFB11Q9NX14 153 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 GOLT1BQ9Y3E0 138 aa6.75□□□□□ -1.33
GPNMB-211ENST00000479625 F5H768 121 aa6.74□□□□□ -1.33
GPNMB-211ENST00000479625 F6UB75 175 aa6.74□□□□□ -1.33
GPNMB-211ENST00000479625 SMR3BP02814 79 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-211ENST00000479625 BTF3P20290 206 aaKnown RBP6.74□□□□□ -1.33
GPNMB-211ENST00000479625 SNCAP37840 140 aa6.74□□□□□ -1.33
GPNMB-211ENST00000479625 NKX2-1P43699 371 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-211ENST00000479625 RFX2P48378 723 aa6.74□□□□□ -1.33
GPNMB-211ENST00000479625 CCL18P55774 89 aa6.74□□□□□ -1.33
GPNMB-211ENST00000479625 RRN3P1Q2M238 152 aa6.74□□□□□ -1.33
GPNMB-211ENST00000479625 SIGLEC15Q6ZMC9 328 aa6.74□□□□□ -1.33
GPNMB-211ENST00000479625 WDR12Q9GZL7 423 aaKnown RBP6.74□□□□□ -1.33
GPNMB-211ENST00000479625 RRP15Q9Y3B9 282 aaKnown RBP6.74□□□□□ -1.33
GPNMB-211ENST00000479625 LRP1Q07954 4544 aaKnown RBP6.74□□□□□ -1.33
GPNMB-211ENST00000479625 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 TRDV1A0A1B0GX56 115 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 GPR31O00270 319 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 PMP2P02689 132 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 DEFB130BP0DP73 79 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 DEFB130AP0DP74 79 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 ALDH3B2P48448 385 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 RORCP51449 518 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 AP2S1P53680 142 aaPredicted RBP6.73□□□□□ -1.33
GPNMB-211ENST00000479625 HAMPP81172 84 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 FCN2Q15485 313 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 SFXN4Q6P4A7 337 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 TBC1D26Q86UD7 250 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 CMTM1Q8IZ96 169 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 SLC35G3Q8N808 338 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 OR4X1Q8NH49 305 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 LINC00052Q96N35 136 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 UHRF2Q96PU4 802 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 Q9H3A6 140 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 AUNIPQ9H7T9 357 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 Q9H8V8 135 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 PRR13Q9NZ81 148 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 TPRKBQ9Y3C4 175 aa6.73□□□□□ -1.33
GPNMB-211ENST00000479625 ZNF705GA8MUZ8 300 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-211ENST00000479625 CORTO00230 105 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 IL4P05112 153 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 IGLC1P0CG04 106 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 HOXA1P49639 335 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-211ENST00000479625 DHODHQ02127 395 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 CLINT1Q14677 625 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 TBCEQ15813 527 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-211ENST00000479625 ZNF79Q15937 498 aa6.72□□□□□ -1.33
GPNMB-211ENST00000479625 TTC32Q5I0X7 151 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms