RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 BORCS7-ASMTA0A0B4J1R7 106 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 TRAV41A0A0B4J266 112 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 UBE2L5PA0A1B0GUS4 154 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 FNDC10F2Z333 226 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 TRIM77I1YAP6 450 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 SOX15O60248 233 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 CRLF1O75462 422 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 DFFBO76075 338 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 PRH1P02810 166 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 MDKP21741 143 aaPredicted RBP5.19□□□□□ -1.58
USP48-208ENST00000479177 IFITM2Q01629 132 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 CFHR3Q02985 330 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 EXOSC2Q13868 293 aaKnown RBP5.19□□□□□ -1.58
USP48-208ENST00000479177 ZNF266Q14584 549 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 ATP6V1FQ16864 119 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 AKIRIN2Q53H80 203 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 UBAC2Q8NBM4 344 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 OR5T1Q8NG75 326 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 OR1L6Q8NGR2 347 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 NOL4LQ96MY1 436 aaPredicted RBP5.19□□□□□ -1.58
USP48-208ENST00000479177 MLST8Q9BVC4 326 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 GGACTQ9BVM4 153 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 GON7Q9BXV9 100 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 PARD6GQ9BYG4 376 aaPredicted RBP5.19□□□□□ -1.58
USP48-208ENST00000479177 PRSS22Q9GZN4 317 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 ARV1Q9H2C2 271 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 FNDC4Q9H6D8 234 aaPredicted RBP5.19□□□□□ -1.58
USP48-208ENST00000479177 UQCC1Q9NVA1 299 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
USP48-208ENST00000479177 ZFHX3Q15911 3703 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 TRBV9A0A0B4J1U6 114 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 RPS10-NUDT3A0A1W2PQS6 291 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 SMCO3A2RU48 225 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 I3L2K1 104 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 K7EIM0 57 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 CORTO00230 105 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 TSPAN9O75954 239 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 JTBO76095 146 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 MT-CO2P00403 227 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 CFDP00746 253 aaPredicted RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 DEFA4P12838 97 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 TPT1P13693 172 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 HIST1H1BP16401 226 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 FGF7P21781 194 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 PPIFP30405 207 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 GPX4P36969 197 aaPredicted RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 OPRK1P41145 380 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 RPL15P61313 204 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 EIF5AP63241 154 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 DEFA5Q01523 94 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 GAMTQ14353 236 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 BAP18Q8IXM2 172 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 CACNG8Q8WXS5 425 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 SLC35E1Q96K37 410 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 GINS3Q9BRX5 216 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 WDR61Q9GZS3 305 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 SLA2Q9H6Q3 261 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 MRPL36Q9P0J6 103 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 LINC00527Q9UJ94 153 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 WDR83OSQ9Y284 106 aa5.18□□□□□ -1.58
USP48-208ENST00000479177 LSM4Q9Y4Z0 139 aaKnown RBP5.18□□□□□ -1.58
USP48-208ENST00000479177 MFSD2BA6NFX1 497 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 H3BUA1 57 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 CYB5BO43169 146 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 OR2J3O76001 311 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 NDUFB8O95169 186 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 BRI3O95415 125 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 IFNA5P01569 189 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 IGHV3-48P01763 117 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 ATP6V0CP27449 155 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 RND2P52198 227 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 RHOGP84095 191 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 RUNX1Q01196 453 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 AKR1C1Q04828 323 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 FHL2Q14192 279 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 ETFRF1Q6IPR1 90 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 SLC25A24Q6NUK1 477 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 BTNL8Q6UX41 500 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 Q6ZSV7 163 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 TMEM144Q7Z5S9 345 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 THAP8Q8NA92 274 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 HSD17B11Q8NBQ5 300 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 TMEM116Q8NCL8 245 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 OR2T6Q8NHC8 308 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 TAF15Q92804 592 aaKnown RBP eCLIP5.17□□□□□ -1.58
USP48-208ENST00000479177 PHYHIPLQ96FC7 376 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 NPCDR1Q9BY65 106 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 SH3BGRL3Q9H299 93 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 SERTAD4Q9NUC0 356 aa5.17□□□□□ -1.58
USP48-208ENST00000479177 IGKV1D-37A0A075B6S9 117 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 IGKV1OR2-108A0A075B7D4 117 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 IGHV3-21A0A0B4J1V1 117 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 TMEM89A2RUT3 159 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 FAM223BA6NKX1 122 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 TCF21O43680 179 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 MPDU1O75352 247 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 IGHG4P01861 327 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 SPP1P10451 314 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 C15orf32Q32M92 178 aa5.16□□□□□ -1.58
USP48-208ENST00000479177 TEX261Q6UWH6 196 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms