RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 ST8SIA2Q92186 375 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 NPIPB3Q92617 1050 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 ACY3Q96HD9 319 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 SPATA25Q9BR10 227 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 RETNQ9HD89 108 aa16.97■□□□□ 0.31
TRAF4-211ENST00000478021 KMT2CQ8NEZ4 4911 aaKnown RBP16.96■□□□□ 0.31
TRAF4-211ENST00000478021 TRAV30A0A087WSZ9 112 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 A6NHS1 94 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 IFNA4P05014 189 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 OR10J1P30954 320 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 TFPI2P48307 235 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 C4orf46Q504U0 113 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 ETFRF1Q6IPR1 90 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 OR1S2Q8NGQ3 325 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 CITED4Q96RK1 184 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 MAGT1Q9H0U3 335 aa16.96■□□□□ 0.31
TRAF4-211ENST00000478021 OR4C46A6NHA9 309 aa16.95■□□□□ 0.3
TRAF4-211ENST00000478021 MPTX1A8MV57 137 aa16.95■□□□□ 0.3
TRAF4-211ENST00000478021 LILRB2Q8N423 598 aa16.95■□□□□ 0.3
TRAF4-211ENST00000478021 COQ8AQ8NI60 647 aa16.95■□□□□ 0.3
TRAF4-211ENST00000478021 PAIP2BQ9ULR5 123 aaKnown RBP16.95■□□□□ 0.3
TRAF4-211ENST00000478021 FAM90A26D6RGX4 464 aa16.94■□□□□ 0.3
TRAF4-211ENST00000478021 ODF3L2Q3SX64 289 aa16.94■□□□□ 0.3
TRAF4-211ENST00000478021 TCF24Q7RTU0 167 aa16.94■□□□□ 0.3
TRAF4-211ENST00000478021 GBGT1Q8N5D6 347 aa16.94■□□□□ 0.3
TRAF4-211ENST00000478021 CCDC32Q9BV29 185 aa16.94■□□□□ 0.3
TRAF4-211ENST00000478021 C20orf85Q9H1P6 137 aa16.94■□□□□ 0.3
TRAF4-211ENST00000478021 VSIRQ9H7M9 311 aa16.94■□□□□ 0.3
TRAF4-211ENST00000478021 WRBO00258 174 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 MED6O75586 246 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 NPPCP23582 126 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 BMI1P35226 326 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 FAM90A2PQ658T7 463 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 METTL26Q96S19 204 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 FAM110AQ9BQ89 295 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 TENM3Q9P273 2699 aa16.93■□□□□ 0.3
TRAF4-211ENST00000478021 SYNGR2O43760 224 aa16.92■□□□□ 0.3
TRAF4-211ENST00000478021 DFFBO76075 338 aa16.92■□□□□ 0.3
TRAF4-211ENST00000478021 Q8WTZ3 238 aa16.92■□□□□ 0.3
TRAF4-211ENST00000478021 TCRBP04435 133 aa16.91■□□□□ 0.3
TRAF4-211ENST00000478021 YPEL3P61236 119 aaPredicted RBP16.91■□□□□ 0.3
TRAF4-211ENST00000478021 WFDC3Q8IUB2 231 aa16.91■□□□□ 0.3
TRAF4-211ENST00000478021 GGTLC1Q9BX51 225 aa16.91■□□□□ 0.3
TRAF4-211ENST00000478021 TRAV6A0A075B6T7 132 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 LOC102724200A0A096LPH7 203 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-211ENST00000478021 IFNA21P01568 189 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 CRYBB3P26998 211 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 ATP5IP56385 69 aaPredicted RBP16.9■□□□□ 0.3
TRAF4-211ENST00000478021 RAB11AP62491 216 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 RPL11P62913 178 aaKnown RBP16.9■□□□□ 0.3
TRAF4-211ENST00000478021 LINC00299Q6ZSB3 139 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 S100ZQ8WXG8 99 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 SLC35E1Q96K37 410 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 TMEM231Q9H6L2 316 aa16.9■□□□□ 0.3
TRAF4-211ENST00000478021 H3BP45 60 aa16.89■□□□□ 0.29
TRAF4-211ENST00000478021 IL4P05112 153 aa16.89■□□□□ 0.29
TRAF4-211ENST00000478021 GAMTQ14353 236 aa16.89■□□□□ 0.29
TRAF4-211ENST00000478021 APRG1Q8IVJ8 170 aa16.89■□□□□ 0.29
TRAF4-211ENST00000478021 CIB3Q96Q77 187 aaPredicted RBP16.89■□□□□ 0.29
TRAF4-211ENST00000478021 NUDT15Q9NV35 164 aa16.89■□□□□ 0.29
TRAF4-211ENST00000478021 STAB2Q8WWQ8 2551 aa16.89■□□□□ 0.29
TRAF4-211ENST00000478021 A0A1W2PS18 150 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 TOMM40O96008 361 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 GPX4P36969 197 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-211ENST00000478021 P2RY1P47900 373 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 POLR2GP62487 172 aaKnown RBP eCLIP16.88■□□□□ 0.29
TRAF4-211ENST00000478021 USF2Q15853 346 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-211ENST00000478021 ZNF124Q15973 351 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 SPANXN5Q5MJ07 72 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 OR4D5Q8NGN0 318 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 NARS2Q96I59 477 aaKnown RBP16.88■□□□□ 0.29
TRAF4-211ENST00000478021 MS4A6AQ9H2W1 248 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 PTTG2Q9NZH5 202 aa16.88■□□□□ 0.29
TRAF4-211ENST00000478021 ZFP92A6NM28 416 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 DNASE2O00115 360 aaPredicted RBP16.87■□□□□ 0.29
TRAF4-211ENST00000478021 CD5P06127 495 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 HNRNPCP07910 306 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRAF4-211ENST00000478021 RD3LP0DJH9 198 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 PSG1P11464 419 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 PAFAH1B2P68402 229 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 ID3Q02535 119 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 MITD1Q8WV92 249 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 TBC1D24Q9ULP9 559 aa16.87■□□□□ 0.29
TRAF4-211ENST00000478021 IGKV1D-37A0A075B6S9 117 aa16.86■□□□□ 0.29
TRAF4-211ENST00000478021 SCGB1D2O95969 90 aa16.86■□□□□ 0.29
TRAF4-211ENST00000478021 NKX2-1P43699 371 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-211ENST00000478021 RPP30P78346 268 aaKnown RBP16.86■□□□□ 0.29
TRAF4-211ENST00000478021 IAH1Q2TAA2 248 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-211ENST00000478021 SEC22CQ9BRL7 303 aa16.86■□□□□ 0.29
TRAF4-211ENST00000478021 MAP6D1Q9H9H5 199 aa16.86■□□□□ 0.29
TRAF4-211ENST00000478021 EDA2RQ9HAV5 297 aa16.86■□□□□ 0.29
TRAF4-211ENST00000478021 RABAC1Q9UI14 185 aa16.86■□□□□ 0.29
TRAF4-211ENST00000478021 RYR3Q15413 4870 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 CCSO14618 274 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 SSSCA1O60232 199 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 RPL35AP18077 110 aaKnown RBP16.85■□□□□ 0.29
TRAF4-211ENST00000478021 ZNF90Q03938 601 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 FAM24BQ8N5W8 94 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 STXBP6Q8NFX7 210 aa16.85■□□□□ 0.29
TRAF4-211ENST00000478021 OR51G1Q8NGK1 321 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms