RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 DCHS2Q6V1P9 2916 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 IGLC7A0M8Q6 106 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 BUB1B-PAK6H3BSN5 160 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 GZMBP10144 247 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 COMPP49747 757 aaPredicted RBP13.2□□□□□ -0.3
TMEM53-208ENST00000476724 RNF5Q99942 180 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 PAXXQ9BUH6 204 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 TPSG1Q9NRR2 321 aa13.2□□□□□ -0.3
TMEM53-208ENST00000476724 AMMECR1Q9Y4X0 333 aaPredicted RBP13.2□□□□□ -0.3
TMEM53-208ENST00000476724 TSTD3H0UI37 97 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 LY6HO94772 140 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 SSBP2P81877 361 aaPredicted RBP13.19□□□□□ -0.3
TMEM53-208ENST00000476724 OR5I1Q13606 314 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 C8orf46Q8TAG6 207 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 CDC42EP3Q9UKI2 254 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 TRAV5A0A0B4J249 113 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 IGHV1-3A0A0C4DH29 117 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 GATCO43716 136 aaKnown RBP13.19□□□□□ -0.3
TMEM53-208ENST00000476724 ADMP35318 185 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 C11orf71Q6IPW1 123 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 IGF2BP2-AS1Q96M15 143 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 TRGV9Q99603 122 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 CBLN4Q9NTU7 201 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 SIGLEC9Q9Y336 463 aa13.19□□□□□ -0.3
TMEM53-208ENST00000476724 IGHV3-72A0A0B4J1Y9 119 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 PPIAL4CA0A0B4J2A2 164 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 PPIAL4GP0DN37 164 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 TNXAQ16473 311 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 MORN5Q5VZ52 161 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 TMEM116Q8NCL8 245 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 GNB1LQ9BYB4 327 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 TNFRSF19Q9NS68 423 aa13.18□□□□□ -0.3
TMEM53-208ENST00000476724 ZFYVE26Q68DK2 2539 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 OR1L6Q8NGR2 347 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 PERPQ96FX8 193 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 IGLV2-8P01709 118 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 MT-ND6P03923 174 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 CX3CL1P78423 397 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 DEFA6Q01524 100 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 WDR73Q6P4I2 378 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 PPP1R27Q86WC6 154 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 OR8B3Q8NGG8 313 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 OR8B2Q96RD0 313 aa13.17□□□□□ -0.3
TMEM53-208ENST00000476724 MRPL18Q9H0U6 180 aaKnown RBP13.17□□□□□ -0.3
TMEM53-208ENST00000476724 MRPL36Q9P0J6 103 aaKnown RBP13.17□□□□□ -0.3
TMEM53-208ENST00000476724 REG1AP05451 166 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 C9orf152Q5JTZ5 239 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 FAM209BQ5JX69 171 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
TMEM53-208ENST00000476724 LINC00305Q7Z4B0 112 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 RPEQ96AT9 228 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 FCN1O00602 326 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 RNF224P0DH78 156 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 CBLN1P23435 193 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 HCP5Q6MZN7 132 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 FXYD5Q96DB9 178 aa13.16□□□□□ -0.3
TMEM53-208ENST00000476724 LIPFP07098 398 aa13.15□□□□□ -0.3
TMEM53-208ENST00000476724 PYYP10082 97 aa13.15□□□□□ -0.3
TMEM53-208ENST00000476724 ZNF329Q86UD4 541 aa13.15□□□□□ -0.3
TMEM53-208ENST00000476724 LURAP1LQ8IV03 231 aa13.15□□□□□ -0.3
TMEM53-208ENST00000476724 SRSF8Q9BRL6 282 aaKnown RBP13.15□□□□□ -0.3
TMEM53-208ENST00000476724 RAB1BQ9H0U4 201 aa13.15□□□□□ -0.3
TMEM53-208ENST00000476724 RNASE7Q9H1E1 156 aaKnown RBP13.15□□□□□ -0.3
TMEM53-208ENST00000476724 F11RQ9Y624 299 aaKnown RBP13.15□□□□□ -0.3
TMEM53-208ENST00000476724 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 C22orf46C9J442 243 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 IGHV3-48P01763 117 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 ESDP10768 282 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 CRISP2P16562 243 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 IER3P46695 156 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 MFAP2P55001 183 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 PLP1P60201 277 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 PAFAH1B2P68402 229 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 IQCJQ1A5X6 159 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 LY6G5BQ8NDX9 201 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 SNURFLB1AK76 121 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 LY6LH3BQJ8 138 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 PEX7O00628 323 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 MGST1P10620 155 aaKnown RBP13.14□□□□□ -0.31
TMEM53-208ENST00000476724 CNTFRP26992 372 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 FAM231DQ6ZW35 169 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 DTX2Q86UW9 622 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 TMEM256Q8N2U0 113 aa13.14□□□□□ -0.31
TMEM53-208ENST00000476724 HYPMO75409 117 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 DDTP30046 118 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 MYCNOSP40205 109 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 Q0VG73 95 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 CMTM2Q8TAZ6 248 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 SMIM12Q96EX1 92 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 NOL4LQ96MY1 436 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-208ENST00000476724 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 UBTD1Q9HAC8 227 aa13.13□□□□□ -0.31
TMEM53-208ENST00000476724 PAX1P15863 534 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 ORM2P19652 201 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 COX7A1P24310 79 aa13.12□□□□□ -0.31
TMEM53-208ENST00000476724 CDKN1AP38936 164 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms