RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 DSCAMO60469 2012 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 SVEP1Q4LDE5 3571 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 AKAP13Q12802 2813 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 VDAC2P45880 294 aaPredicted RBP6.84□□□□□ -1.31
VAPB-205ENST00000476395 SSBP2P81877 361 aaPredicted RBP6.84□□□□□ -1.31
VAPB-205ENST00000476395 TBR1Q16650 682 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 SLC35E4Q6ICL7 350 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 ACP7Q6ZNF0 438 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 PNKDQ8N490 385 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 TMEM116Q8NCL8 245 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 OR5B3Q8NH48 314 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 PERPQ96FX8 193 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 FAM234AQ9H0X4 552 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 SPTBN4Q9H254 2564 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 CACNA1GO43497 2377 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 M0R1X1 148 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 KLK10O43240 276 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 IGHV3-13P01766 116 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 IGHV3-7P01780 117 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 PRB4P10163 310 aaPredicted RBP6.84□□□□□ -1.31
VAPB-205ENST00000476395 SRSF6Q13247 344 aaKnown RBP6.84□□□□□ -1.31
VAPB-205ENST00000476395 FAM120AOSQ5T036 256 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 TREML4Q6UXN2 200 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 WDR31Q8NA23 367 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 OR10X1Q8NGY0 326 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 KLF14Q8TD94 323 aaPredicted RBP6.84□□□□□ -1.31
VAPB-205ENST00000476395 SGK494Q96LW2 274 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 RTL8AQ9BWD3 113 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 NPVFQ9HCQ7 196 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 WDR83OSQ9Y284 106 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 SVILO95425 2214 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 IGHV3-43A0A0B4J1X8 118 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 AGFG2O95081 481 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 FAM87AP0C7U9 286 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 IGHV3-43DP0DP04 118 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 GCHFRP30047 84 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 ABHD12Q8N2K0 398 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 OR4A5Q8NH83 315 aa6.84□□□□□ -1.31
VAPB-205ENST00000476395 ADGRG4Q8IZF6 3080 aa6.84□□□□□ -1.32
VAPB-205ENST00000476395 TANC2Q9HCD6 1990 aa6.84□□□□□ -1.32
VAPB-205ENST00000476395 C7orf71A4D174 169 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 DEFB108AA8MXU0 73 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 GNG4P50150 75 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 LOXL3P58215 753 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 RHOBP62745 196 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 FAM71F2Q6NXP2 309 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 MIR17HGQ75NE6 70 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 MOB3BQ86TA1 216 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 RAB37Q96AX2 223 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 UBTD1Q9HAC8 227 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 ZNF355PQ9NSJ1 428 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 THYN1Q9P016 225 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 LSM4Q9Y4Z0 139 aaKnown RBP6.83□□□□□ -1.32
VAPB-205ENST00000476395 ARFGEF3Q5TH69 2177 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 VWC2LB2RUY7 222 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 IGKV3-15P01624 115 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 AMY1AP04745 511 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 GRPP07492 148 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 DUTP33316 252 aaKnown RBP6.83□□□□□ -1.32
VAPB-205ENST00000476395 PLP1P60201 277 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 RPL32P62910 135 aaKnown RBP6.83□□□□□ -1.32
VAPB-205ENST00000476395 MEF2CQ06413 473 aaPredicted RBP6.83□□□□□ -1.32
VAPB-205ENST00000476395 SSX8Q7RTT4 187 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 Q8IYB0 196 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 DDB2Q92466 427 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 DEFB127Q9H1M4 99 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 GCM1Q9NP62 436 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 ZNF835Q9Y2P0 537 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 GAGE10A6NGK3 116 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 G3V4G9 280 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 MFAP2P55001 183 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 TMPRSS3P57727 454 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 PAX2Q02962 417 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 TEX45Q8NA69 505 aa6.83□□□□□ -1.32
VAPB-205ENST00000476395 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.83□□□□□ -1.32
VAPB-205ENST00000476395 SPAARA0A1B0GVQ0 90 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 LYZL6O75951 148 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 TOX4O94842 621 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 IGLV2-8P01709 118 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 CD59P13987 128 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 PLP2Q04941 152 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 MRPL23Q16540 153 aaKnown RBP6.82□□□□□ -1.32
VAPB-205ENST00000476395 LTC4SQ16873 150 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 GALMQ96C23 342 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 PCNX2A6NKB5 2137 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 TNCP24821 2201 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 DYSFO75923 2080 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 IGKV1D-17A0A075B6S4 117 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 TMEM30CPA0ZSE6 113 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 OOEPA6NGQ2 149 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 H3BUT2 72 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 CDX4O14627 284 aaPredicted RBP6.82□□□□□ -1.32
VAPB-205ENST00000476395 GFRA3O60609 400 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 MYOD1P15172 320 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 EFNB3Q15768 340 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 CR1LQ2VPA4 569 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 SLC25A34Q6PIV7 304 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 OR11H12B2RN74 326 aa6.82□□□□□ -1.32
VAPB-205ENST00000476395 GGTLC3B5MD39 225 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms