RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 CCDC167Q9P0B6 97 aa2.8□□□□□ -1.96
SDHB-205ENST00000475506 PXMP4Q9Y6I8 212 aa2.8□□□□□ -1.96
SDHB-205ENST00000475506 SDK2Q58EX2 2172 aa2.8□□□□□ -1.96
SDHB-205ENST00000475506 PTPRFP10586 1907 aa2.8□□□□□ -1.96
SDHB-205ENST00000475506 TANC1Q9C0D5 1861 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 RGPD8O14715 1765 aaPredicted RBP2.79□□□□□ -1.96
SDHB-205ENST00000475506 RGPD5Q99666 1765 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 RREB1Q92766 1687 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 hCG_1818297A0A087WSY0 165 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 MEIKINA0A087WXM9 373 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 A0A1W2PNM2 257 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 OR6C6A6NF89 314 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 HMSDA8MTL9 139 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 APOC4-APOC2K7ER74 178 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 M0R143 59 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 LY6HO94772 140 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 APOMO95445 188 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 APOC2P02655 101 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 MT-ND4LP03901 98 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 NMBP08949 121 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 ZNF25P17030 456 aaPredicted RBP2.79□□□□□ -1.96
SDHB-205ENST00000475506 NFYAP23511 347 aaPredicted RBP2.79□□□□□ -1.96
SDHB-205ENST00000475506 NPPCP23582 126 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 DNAJB13P59910 316 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 ERVS71-1P61550 626 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 TNFRSF9Q07011 255 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 HIST3H3Q16695 136 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 PLPPR5Q32ZL2 321 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 SPANXN3Q5MJ09 141 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 DEFB125Q8N687 156 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 OR2D3Q8NGH3 330 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 OR2T35Q8NGX2 323 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 NEK7Q8TDX7 302 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 ACOT12Q8WYK0 555 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 PRAP1Q96NZ9 151 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 CCL13Q99616 98 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 PKMYT1Q99640 499 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 MRPL57Q9BQC6 102 aaKnown RBP2.79□□□□□ -1.96
SDHB-205ENST00000475506 GGACTQ9BVM4 153 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 GNG8Q9UK08 70 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 LAMB4A4D0S4 1761 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 PLCH1Q4KWH8 1693 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 RIMS1Q86UR5 1692 aaKnown RBP2.79□□□□□ -1.96
SDHB-205ENST00000475506 RIMBP3CA6NJZ7 1639 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 RIMBP3BA6NNM3 1639 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 LTBP4Q8N2S1 1624 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 RIMBP3Q9UFD9 1639 aa2.79□□□□□ -1.96
SDHB-205ENST00000475506 A0A0D9SG52 128 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 IRGMA1A4Y4 181 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 ZNF670-ZNF695F2Z2N8 137 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 PLA2G10O15496 165 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 DLEU1O43261 78 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 OR2T1O43869 369 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 MPC2O95563 127 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 CRHP06850 196 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 P0C880 135 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 CBR1P16152 277 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 HIST1H1BP16401 226 aaKnown RBP2.78□□□□□ -1.96
SDHB-205ENST00000475506 FGF7P21781 194 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 KDELR1P24390 212 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 ATP6V0CP27449 155 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 TAS2R45P59539 299 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 TNFAIP6P98066 277 aaPredicted RBP2.78□□□□□ -1.96
SDHB-205ENST00000475506 CST6Q15828 149 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 LGALS9BQ3B8N2 356 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 FAM74A1Q5RGS3 127 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 FAM201AQ5SY85 155 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 AKR1C8PQ5T2L2 129 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 C9orf64Q5T6V5 341 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 LGALS9CQ6DKI2 356 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 LPCAT3Q6P1A2 487 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 ANGPTL5Q86XS5 388 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 GPHB5Q86YW7 130 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 C1orf158Q8N1D5 194 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 LYPD1Q8N2G4 141 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 DAND5Q8N907 189 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 OR10K1Q8NGX5 313 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 OR10A6Q8NH74 314 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 FNDC9Q8TBE3 224 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 ARL11Q969Q4 196 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 GNPNAT1Q96EK6 184 aaPredicted RBP2.78□□□□□ -1.96
SDHB-205ENST00000475506 TVP23CQ96ET8 276 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 IMP4Q96G21 291 aaKnown RBP2.78□□□□□ -1.96
SDHB-205ENST00000475506 SMDT1Q9H4I9 107 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 RNF122Q9H9V4 155 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 ZNF391Q9UJN7 358 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 MMACHCQ9Y4U1 282 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 LSM5Q9Y4Y9 91 aaKnown RBP2.78□□□□□ -1.96
SDHB-205ENST00000475506 V9GYH0 126 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 V9GYS6 101 aa2.78□□□□□ -1.96
SDHB-205ENST00000475506 AFDNP55196 1824 aaKnown RBP2.77□□□□□ -1.97
SDHB-205ENST00000475506 LAMB2P55268 1798 aa2.77□□□□□ -1.97
SDHB-205ENST00000475506 KIDINS220Q9ULH0 1771 aa2.77□□□□□ -1.97
SDHB-205ENST00000475506 PLIN4Q96Q06 1357 aa2.77□□□□□ -1.97
SDHB-205ENST00000475506 MON2Q7Z3U7 1717 aa2.77□□□□□ -1.97
SDHB-205ENST00000475506 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.77□□□□□ -1.97
SDHB-205ENST00000475506 TOGARAM1Q9Y4F4 1720 aa2.77□□□□□ -1.97
SDHB-205ENST00000475506 C3P01024 1663 aa2.77□□□□□ -1.97
SDHB-205ENST00000475506 IGKV2-24A0A0C4DH68 120 aa2.77□□□□□ -1.97
SDHB-205ENST00000475506 KANTRA0A1W2PQU2 76 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms