RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZNF355PQ9NSJ1 428 aa12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 SPTAN1Q13813 2472 aaKnown RBP12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 MED13LQ71F56 2210 aa12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 ELOA3CA0A087WX78 387 aaPredicted RBP12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 FAM106CPP0CH98 169 aa12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 CTAG1AP78358 180 aa12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 Q8N6K4 173 aa12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 OR5AU1Q8NGC0 362 aa12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 FAM167A-AS1Q96KT0 104 aa12.2□□□□□ -0.46
RPUSD3-215ENST00000475470 H7BYZ3 331 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 I3L2K1 104 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 ORM2P19652 201 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 ATP5J2P56134 94 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 ZNF562Q6V9R5 426 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 LINC01551Q86U37 167 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 OR1L6Q8NGR2 347 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 OR1B1Q8NGR6 318 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 S100A9P06702 114 aaKnown RBP12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 SAA4P35542 130 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 UBE2L3P68036 154 aaKnown RBP12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 CX3CL1P78423 397 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 CLEC2AQ6UVW9 174 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 ANAPC16Q96DE5 110 aa12.19□□□□□ -0.46
RPUSD3-215ENST00000475470 NDUFS8O00217 210 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 BRS3P32247 399 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 C10orf105Q8TEF2 133 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 ARPC1AQ92747 370 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 C11orf52Q96A22 123 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 GSX1Q9H4S2 264 aaPredicted RBP12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 AURKAIP1Q9NWT8 199 aaPredicted RBP12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 POLR3KQ9Y2Y1 108 aaPredicted RBP12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 USP24Q9UPU5 2620 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 IGHV4-61A0A0C4DH41 118 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 C1QL4Q86Z23 238 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 NECAP1Q8NC96 275 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 PERPQ96FX8 193 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 OR5B12Q96R08 314 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
RPUSD3-215ENST00000475470 DOPEY1Q5JWR5 2465 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 PGPEP1LA6NFU8 196 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 NPFFO15130 113 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 S100A8P05109 93 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 AJUBAQ96IF1 538 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 FAM210BQ96KR6 192 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 C1RLQ9NZP8 487 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 TRBV20OR9-2A0A075B6H5 130 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 HYPMO75409 117 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 SMIM6P0DI80 62 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 S100PP25815 95 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 GALR1P47211 349 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 FAM120AOSQ5T036 256 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 ZNF843Q8N446 348 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 OR51M1Q9H341 326 aa12.17□□□□□ -0.46
RPUSD3-215ENST00000475470 AP4M1O00189 453 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 IGLC1P0CG04 106 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 PYYP10082 97 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 CRYBB3P26998 211 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 SUMO1P63165 101 aaKnown RBP12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 RASL11BQ9BPW5 248 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 NIT2Q9NQR4 276 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 COL12A1Q99715 3063 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 CENPVL3A0A0U1RRI6 287 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 GGTLC3B5MD39 225 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 K7EIM0 57 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 PAX8Q06710 450 aa12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 RBM14Q96PK6 669 aaKnown RBP12.16□□□□□ -0.46
RPUSD3-215ENST00000475470 TRBV24-1A0A075B6N3 115 aa12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 VWC2LB2RUY7 222 aa12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 S100A12P80511 92 aa12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 KLF17Q5JT82 389 aaPredicted RBP12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 PIP4P2Q8N4L2 257 aa12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 STXBP6Q8NFX7 210 aa12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 OCC1Q8TAD7 63 aa12.15□□□□□ -0.46
RPUSD3-215ENST00000475470 HELTA6NFD8 242 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 PSG1P11464 419 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 CD99P14209 185 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 HNF1AP20823 631 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 PLP1P60201 277 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 NDPQ00604 133 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 TIGITQ495A1 244 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 ASPHD1Q5U4P2 390 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 Q8N9W7 124 aa12.15□□□□□ -0.47
RPUSD3-215ENST00000475470 TTC9CQ8N5M4 171 aa12.14□□□□□ -0.47
RPUSD3-215ENST00000475470 FLNCQ14315 2725 aa12.14□□□□□ -0.47
RPUSD3-215ENST00000475470 IGHV4-30-2A0A087WSY4 118 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 MDFIC2A0A1B0GVS7 189 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 LINC00587B1AMM8 73 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 C9JCJ5 164 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 PPP1R2P9O14990 202 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 FABP1P07148 127 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 LYZP61626 148 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 FXYD5Q96DB9 178 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 SFRP2Q96HF1 295 aa12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 USP9XQ93008 2570 aaPredicted RBP12.13□□□□□ -0.47
RPUSD3-215ENST00000475470 IGHV7-81A0A0B4J1V7 117 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms