RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 FAM210AQ96ND0 272 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 C19orf24Q9BVV8 132 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 ZNF355PQ9NSJ1 428 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 FBXL7Q9UJT9 491 aa10.77□□□□□ -0.69
TRAF4-210ENST00000475329 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 AP4M1O00189 453 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 SCGB2A1O75556 95 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 NDUFB8O95169 186 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 IGLC1P0CG04 106 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 GATA2P23769 480 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-210ENST00000475329 NPBWR1P48145 328 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 FGF8P55075 233 aaPredicted RBP10.76□□□□□ -0.69
TRAF4-210ENST00000475329 BLCAPP62952 87 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 CCL20P78556 96 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 ZNF90Q03938 601 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 GUK1Q16774 197 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 TOR2AQ5JU69 321 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 OR1L4Q8NGR5 311 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 VN1R17PQ8TDU5 208 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 RNF2Q99496 336 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 TREM1Q9NP99 234 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 C21orf62Q9NYP8 219 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 ZNF580Q9UK33 172 aa10.76□□□□□ -0.69
TRAF4-210ENST00000475329 TRAV30A0A087WSZ9 112 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 TRBV9A0A0B4J1U6 114 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 HMGB3O15347 200 aaKnown RBP10.75□□□□□ -0.69
TRAF4-210ENST00000475329 COX7A2P2O60397 106 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 IFNA1P01562 189 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 RHOGP84095 191 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 PEA15Q15121 130 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 Q56UQ5 140 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 TMEM86BQ8N661 226 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 NECAP1Q8NC96 275 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 NARS2Q96I59 477 aaKnown RBP10.75□□□□□ -0.69
TRAF4-210ENST00000475329 PFDN5Q99471 154 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 TXN2Q99757 166 aa10.75□□□□□ -0.69
TRAF4-210ENST00000475329 GSX1Q9H4S2 264 aaPredicted RBP10.75□□□□□ -0.69
TRAF4-210ENST00000475329 FAM223BA6NKX1 122 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 KRBOX1C9JBD0 128 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 H3BUA1 57 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 GNG7O60262 68 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 EIF3GO75821 320 aaKnown RBP eCLIP10.74□□□□□ -0.69
TRAF4-210ENST00000475329 OR5G3P0C626 314 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 ZP3P21754 424 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 SRSF3P84103 164 aaKnown RBP10.74□□□□□ -0.69
TRAF4-210ENST00000475329 DEFA5Q01523 94 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 SCGB2A2Q13296 93 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 TIGITQ495A1 244 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 FAM78BQ5VT40 261 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 RBMS3Q6XE24 437 aaKnown RBP10.74□□□□□ -0.69
TRAF4-210ENST00000475329 FAM223AQ8IWN6 122 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 GATAD1Q8WUU5 269 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 MRPL32Q9BYC8 188 aaKnown RBP10.74□□□□□ -0.69
TRAF4-210ENST00000475329 NPFFR1Q9GZQ6 430 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 EIF5A2Q9GZV4 153 aaKnown RBP10.74□□□□□ -0.69
TRAF4-210ENST00000475329 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 TMEM160Q9NX00 188 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 GNG13Q9P2W3 67 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 LINC00527Q9UJ94 153 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 FUT9Q9Y231 359 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 S4R3C0 116 aa10.74□□□□□ -0.69
TRAF4-210ENST00000475329 PSMB11A5LHX3 300 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 RBFOX3A6NFN3 312 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 BRI3O95415 125 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 CXorf1O96002 111 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 CD5P06127 495 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 STAG3L2P0CL84 134 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 STAG3L3P0CL85 134 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 FCGR2BP31994 310 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-210ENST00000475329 PMS2P11Q13670 270 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 HAGHQ16775 308 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 ZNF506Q5JVG8 444 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 C10orf113Q5VZT2 155 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 Q6ZS46 218 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 IQCF2Q8IXL9 164 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 NOL4LQ96MY1 436 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-210ENST00000475329 SCRT1Q9BWW7 348 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 PRSS22Q9GZN4 317 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 DNAJC4Q9NNZ3 241 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 DOK5Q9P104 306 aa10.73□□□□□ -0.69
TRAF4-210ENST00000475329 ELOA3CA0A087WX78 387 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-210ENST00000475329 LOC102723971A0A1B0GUV8 181 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 F8W735 103 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-210ENST00000475329 TOMM40O96008 361 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 TRGV3P03979 118 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 ARL14EPLP0DKL9 152 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 BCL2P10415 239 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 PSMB3P49720 205 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 PPT1P50897 306 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 TAS2R45P59539 299 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 PLP1P60201 277 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 YPEL3P61236 119 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-210ENST00000475329 MIR17HGQ75NE6 70 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 ZNF502Q8TBZ5 544 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 EEF1AKMT3Q96AZ1 226 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 LINC00052Q96N35 136 aa10.72□□□□□ -0.69
TRAF4-210ENST00000475329 MS4A10Q96PG2 267 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms