RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TIMM9Q9Y5J7 89 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 HILPDAQ9Y5L2 63 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 RALGAPA2Q2PPJ7 1873 aa4.84□□□□□ -1.63
ECHDC1-215ENST00000475319 ANKRD12Q6UB98 2062 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 PIKFYVEQ9Y2I7 2098 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 TMED7-TICAM2A0A0A6YYA0 188 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 CTXND1A0A1B0GTU2 59 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 SHISA9B4DS77 424 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 VCYO14598 125 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 LEPROTL1O95214 131 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 CLDN7O95471 211 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 CRYGAP11844 174 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 BCL3P20749 454 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 C1orf100Q5SVJ3 147 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 GAGE2AQ6NT46 116 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 SMRP1Q8NCR6 262 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 OR2A1Q8NGT9 310 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 OR2T6Q8NHC8 308 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 DLX4Q92988 240 aaPredicted RBP4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 ELSPBP1Q96BH3 223 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 C9orf85Q96MD7 179 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 APOOQ9BUR5 198 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM147Q9BVK8 224 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM222Q9H0R3 208 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 KCNIP2Q9NS61 270 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 MCM3APO60318 1980 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 SCN1AP35498 2009 aa4.83□□□□□ -1.64
ECHDC1-215ENST00000475319 SIP14410 1827 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 IGHV1-24A0A0C4DH33 117 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 C3orf85A0A1B0GTC6 90 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 LOC107986453A0A1B0GWG9 222 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 FCGR3BO75015 233 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 NTN1O95631 604 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 PLAUP00749 431 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 CT62P0C5K7 136 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 TFF2Q03403 129 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 EIF3IQ13347 325 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 RRN3P1Q2M238 152 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 VWC2Q2TAL6 325 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 ZNF718Q3SXZ3 478 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 PQLC2Q6ZP29 291 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 DEFB106AQ8N104 65 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 RFLNBQ8N5W9 214 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 ZPLD1Q8TCW7 415 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 IGFBPL1Q8WX77 278 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 NUS1Q96E22 293 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 DNAJA3Q96EY1 480 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 C18orf12Q96KH6 178 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 RNASE7Q9H1E1 156 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 TICRRQ7Z2Z1 1910 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 RANBP2P49792 3224 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 TRAV4A0A0B4J268 109 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 TRBV7-7A0A0K0K1E9 115 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 ZIC3O60481 467 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 NDUFC2O95298 119 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 VPREB1P12018 145 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 IL9P15248 144 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 CSN1S1P47710 185 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 DYNLT3P51808 116 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 NANOS3P60323 173 aaKnown RBP4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 PLGLB1Q02325 96 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 C1orf61Q13536 156 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 MLF2Q15773 248 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 ZNF726P1Q15940 193 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 LYSMD4Q5XG99 296 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 OR4C11Q6IEV9 310 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 Q6P435 159 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 ACP7Q6ZNF0 438 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 NFE4Q86UQ8 179 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 SBSPONQ8IVN8 264 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 STHQ8IWL8 128 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 MMD2Q8IY49 270 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 GVQW1Q8N7I0 195 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 MDS2Q8NDY4 140 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 OR10AC1Q8NH08 325 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 LRRC29Q8WV35 223 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 DPH3Q96FX2 82 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 BBC3Q96PG8 261 aaPredicted RBP4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 SPRY4Q9C004 299 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 TNFRSF19Q9NS68 423 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 PKIGQ9Y2B9 76 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 SELENOKQ9Y6D0 94 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM131Q92545 1883 aa4.82□□□□□ -1.64
ECHDC1-215ENST00000475319 TNRC6AQ8NDV7 1962 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 SHROOM3Q8TF72 1996 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 LINC01553A4QN01 128 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM202A6NGA9 273 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 CPSF4LA6NMK7 179 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 A8MWV9 139 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 C9JCJ5 164 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 OVOL1O14753 267 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 MPDU1O75352 247 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 RENP00797 406 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 TNFRSF4P43489 277 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 CCL11P51671 97 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 UNC119Q13432 240 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 TMEM187Q14656 261 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 MS4A13Q5J8X5 152 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM120AOSQ5T036 256 aa4.81□□□□□ -1.64
ECHDC1-215ENST00000475319 FAM19A1Q7Z5A9 133 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms