RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 NMES1Q9C002 83 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 PSENENQ9NZ42 101 aa12.81□□□□□ -0.36
SCAF11-206ENST00000474828 ZNF256Q9Y2P7 627 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-206ENST00000474828 IGKV1D-37A0A075B6S9 117 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 IGHV3-35A0A0C4DH35 117 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 ZNF320A2RRD8 509 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 FNDC10F2Z333 226 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 EDN2P20800 178 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 H2BFSP57053 126 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 RGS21Q2M5E4 152 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 SPANXN5Q5MJ07 72 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 TOMM20LQ6UXN7 152 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 THAP8Q8NA92 274 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 NPIPB3Q92617 1050 aa12.8□□□□□ -0.36
SCAF11-206ENST00000474828 SCGB2A1O75556 95 aa12.79□□□□□ -0.36
SCAF11-206ENST00000474828 SCAF4O95104 1147 aaKnown RBP12.79□□□□□ -0.36
SCAF11-206ENST00000474828 CYCSP99999 105 aaKnown RBP12.79□□□□□ -0.36
SCAF11-206ENST00000474828 MLXQ9UH92 298 aa12.79□□□□□ -0.36
SCAF11-206ENST00000474828 ALG5Q9Y673 324 aa12.79□□□□□ -0.36
SCAF11-206ENST00000474828 TGP01266 2768 aa12.79□□□□□ -0.36
SCAF11-206ENST00000474828 IGKV1OR2-108A0A075B7D4 117 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 FAM25EA8MYX2 175 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 H3BP45 60 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 K7EIL1 84 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 OR10J1P30954 320 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 RAB32Q13637 225 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 TIGITQ495A1 244 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 SMPXQ9UHP9 88 aa12.78□□□□□ -0.36
SCAF11-206ENST00000474828 LSM4Q9Y4Z0 139 aaKnown RBP12.78□□□□□ -0.36
SCAF11-206ENST00000474828 PUS1Q9Y606 427 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCAF11-206ENST00000474828 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 ZNF785A8K8V0 405 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 GOSR2O14653 212 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 SCGB1D2O95969 90 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 TOMM40O96008 361 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 CD300EQ496F6 205 aaPredicted RBP12.77□□□□□ -0.37
SCAF11-206ENST00000474828 LCN12Q6JVE5 192 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 HAPLN4Q86UW8 402 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 ACY3Q96HD9 319 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 SLC35E1Q96K37 410 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 GGACTQ9BVM4 153 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 VSIRQ9H7M9 311 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 U3KQE9 123 aa12.77□□□□□ -0.37
SCAF11-206ENST00000474828 IGHV7-4-1A0A0J9YVY3 117 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 IZUMO1RA6ND01 250 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 DEDDO75618 318 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 SIX6O95475 246 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 PRB2P02812 416 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-206ENST00000474828 GP9P14770 177 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 CRYBB3P26998 211 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 DLK1P80370 383 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 DMRTA1Q5VZB9 504 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 TRGV9Q99603 122 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 GINS3Q9BRX5 216 aa12.76□□□□□ -0.37
SCAF11-206ENST00000474828 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
SCAF11-206ENST00000474828 TRAV14DV4A0A0A6YYC5 116 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 CHEK1O14757 476 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 SSNA1O43805 119 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 ARL16Q0P5N6 197 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 FAM90A2PQ658T7 463 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 ACOT7LQ6ZUV0 252 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 TMEM144Q7Z5S9 345 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 Q8N1Y9 231 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 Q8WTZ3 238 aa12.75□□□□□ -0.37
SCAF11-206ENST00000474828 H0YIZ8 118 aa12.74□□□□□ -0.37
SCAF11-206ENST00000474828 CCNKO75909 580 aa12.74□□□□□ -0.37
SCAF11-206ENST00000474828 METTL15P1P0C7V9 234 aa12.74□□□□□ -0.37
SCAF11-206ENST00000474828 PSG1P11464 419 aa12.74□□□□□ -0.37
SCAF11-206ENST00000474828 PVALBP20472 110 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-206ENST00000474828 TMEM61Q8N0U2 210 aa12.74□□□□□ -0.37
SCAF11-206ENST00000474828 OR10P1Q8NGE3 313 aa12.74□□□□□ -0.37
SCAF11-206ENST00000474828 WDR89Q96FK6 387 aaPredicted RBP12.74□□□□□ -0.37
SCAF11-206ENST00000474828 C20orf24Q9BUV8 137 aa12.74□□□□□ -0.37
SCAF11-206ENST00000474828 LSM5Q9Y4Y9 91 aaKnown RBP12.74□□□□□ -0.37
SCAF11-206ENST00000474828 SORL1Q92673 2214 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 L7N2F9 121 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 TSPAN4O14817 238 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 YIF1AO95070 293 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 RD3LP0DJH9 198 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 CXCL3P19876 107 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 VAMP2P63027 116 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 VWC2Q2TAL6 325 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 BTNL8Q6UX41 500 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 TMEM252Q8N6L7 170 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 DYNLRB2Q8TF09 96 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 PPP1R1CQ8WVI7 109 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 PRR25Q96S07 402 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 RNF126Q9BV68 326 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 RHPN1-AS1Q9BWJ2 59 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 MGAT4CQ9UBM8 478 aa12.73□□□□□ -0.37
SCAF11-206ENST00000474828 IGHV3OR16-8A0A075B7F1 116 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 A8MZ25 164 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 CFDP00746 253 aaPredicted RBP12.72□□□□□ -0.37
SCAF11-206ENST00000474828 CD5P06127 495 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 LYL1P12980 280 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 ZNF90Q03938 601 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 OR11H7Q8NGC8 314 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 OR51G1Q8NGK1 321 aa12.72□□□□□ -0.37
SCAF11-206ENST00000474828 ASB13Q8WXK3 278 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms