RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 GNB4Q9HAV0 340 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 RNF24Q9Y225 148 aa8.08□□□□□ -1.12
COL12A1-206ENST00000474564 IGHV3-21A0A0B4J1V1 117 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 K7EIM0 57 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 TSPAN15O95858 294 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 MBP02144 154 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 CLEC3BP05452 202 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 FCGR2BP31994 310 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-206ENST00000474564 CDX1P47902 265 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-206ENST00000474564 SERF2P84101 59 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 ACOT6Q3I5F7 207 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-206ENST00000474564 FFAR4Q5NUL3 377 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 TREML4Q6UXN2 200 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 CLEC19AQ6UXS0 136 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 BPIFCQ8NFQ6 507 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 TMEM170AQ8WVE7 144 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 DPF1Q92782 380 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 SAT2Q96F10 170 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-206ENST00000474564 TRGV9Q99603 122 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 ARV1Q9H2C2 271 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 HRH4Q9H3N8 390 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 FNDC4Q9H6D8 234 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-206ENST00000474564 PEF1Q9UBV8 284 aaKnown RBP8.07□□□□□ -1.12
COL12A1-206ENST00000474564 WDR83OSQ9Y284 106 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 TIMM9Q9Y5J7 89 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 ACANP16112 2415 aa8.07□□□□□ -1.12
COL12A1-206ENST00000474564 MAP1AP78559 2803 aaPredicted RBP8.07□□□□□ -1.12
COL12A1-206ENST00000474564 NBPF19A0A087WUL8 3843 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 PRSS46E5RG02 174 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 AGPAT2O15120 278 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 IGHV3-48P01763 117 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 NMBP08949 121 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 RD3LP0DJH9 198 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 ARL3P36405 182 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 MLANAQ16655 118 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 FAM106AQ4KMX7 169 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 TMEM41BQ5BJD5 291 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 DPPA3Q6W0C5 159 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 C19orf35Q6ZS72 473 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 ZNF491Q8N8L2 437 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 RNF152Q8N8N0 203 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 ZNF502Q8TBZ5 544 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 NARS2Q96I59 477 aaKnown RBP8.06□□□□□ -1.12
COL12A1-206ENST00000474564 NPCDR1Q9BY65 106 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 TSSC4Q9Y5U2 329 aaPredicted RBP8.06□□□□□ -1.12
COL12A1-206ENST00000474564 OTOGQ6ZRI0 2925 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 TNCP24821 2201 aa8.06□□□□□ -1.12
COL12A1-206ENST00000474564 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.05□□□□□ -1.12
COL12A1-206ENST00000474564 A0A1B0GV50 99 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 A0A1W2PPV4 95 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 ANKRD34BA5PLL1 514 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 LINC00862A6NCI5 91 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 OR2T8A6NH00 312 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 TGOLN2O43493 480 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 GGCTO75223 188 aaKnown RBP8.05□□□□□ -1.12
COL12A1-206ENST00000474564 YIF1AO95070 293 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 IGHV3-11P01762 117 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 HBE1P02100 147 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 HSPB1P04792 205 aaKnown RBP8.05□□□□□ -1.12
COL12A1-206ENST00000474564 RPLP1P05386 114 aaKnown RBP8.05□□□□□ -1.12
COL12A1-206ENST00000474564 MDKP21741 143 aaPredicted RBP8.05□□□□□ -1.12
COL12A1-206ENST00000474564 ZP3P21754 424 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 S100A1P23297 94 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 GPR183P32249 361 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 RPL29P47914 159 aaKnown RBP8.05□□□□□ -1.12
COL12A1-206ENST00000474564 YPEL3P61236 119 aaPredicted RBP8.05□□□□□ -1.12
COL12A1-206ENST00000474564 ZNF343Q6P1L6 599 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 ZNF600Q6ZNG1 722 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 CYP2G1PQ6ZSU1 146 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 IQCF2Q8IXL9 164 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 THAP8Q8NA92 274 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 OR1L4Q8NGR5 311 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 PFDN5Q99471 154 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 C19orf24Q9BVV8 132 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 KLK15Q9H2R5 256 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 DMRT1Q9Y5R6 373 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 S4R3C0 116 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 PLXNB1O43157 2135 aa8.05□□□□□ -1.12
COL12A1-206ENST00000474564 MFSD2BA6NFX1 497 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 BMPR1BO00238 502 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 IGHV3-23P01764 117 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 LGALS1P09382 135 aaKnown RBP8.04□□□□□ -1.12
COL12A1-206ENST00000474564 H2AFB1P0C5Y9 115 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 BMI1P35226 326 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 PROK1P58294 105 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 RPEL1Q2QD12 228 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 FAM122CQ6P4D5 195 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.04□□□□□ -1.12
COL12A1-206ENST00000474564 OR51G1Q8NGK1 321 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 C4orf3Q8WVX3 66 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 RNF2Q99496 336 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 PBDC1Q9BVG4 233 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 ACTR3CQ9C0K3 210 aaPredicted RBP8.04□□□□□ -1.12
COL12A1-206ENST00000474564 SLC39A9Q9NUM3 307 aa8.04□□□□□ -1.12
COL12A1-206ENST00000474564 LSM4Q9Y4Z0 139 aaKnown RBP8.04□□□□□ -1.12
COL12A1-206ENST00000474564 ELOA3CA0A087WX78 387 aaPredicted RBP8.03□□□□□ -1.12
COL12A1-206ENST00000474564 I3L521 148 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 COX7A2P2O60397 106 aa8.03□□□□□ -1.12
COL12A1-206ENST00000474564 TOMM40O96008 361 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms