RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 C18orf15Q96N68 181 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 CDX2Q99626 313 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 AKIRIN1Q9H9L7 192 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 WNT6Q9Y6F9 365 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 TNRC6BQ9UPQ9 1833 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 PCNX3Q9H6A9 2034 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 SYNGR3O43761 229 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 MYOD1P15172 320 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 DAP3P51398 398 aaKnown RBP4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 SPANXN5Q5MJ07 72 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 TEN1Q86WV5 123 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 OR51H1Q8NH63 302 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 PIFOQ8TCI5 191 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 RASL10AQ92737 203 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 TRBV20-1A0A075B6N2 111 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 IGKV1-9A0A0C4DH69 117 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 C17orf102A2RUQ5 167 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 TNFSF11O14788 317 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 RBP4P02753 201 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 FXYD2P54710 66 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 MFAP2P55001 183 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 TAL2Q16559 108 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 SGCBQ16585 318 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 LGALS9BQ3B8N2 356 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 CENPWQ5EE01 88 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 LGALS9CQ6DKI2 356 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM19A5Q7Z5A7 132 aaPredicted RBP4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 PPP1R27Q86WC6 154 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 GAPTQ8N292 157 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 NUP35Q8NFH5 326 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 KIR2DL5BQ8NHK3 375 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 SGK494Q96LW2 274 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 SPANXDQ9BXN6 97 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 CACNG5Q9UF02 275 aa4.16□□□□□ -1.74
TMEM39A-206ENST00000473684 MED12LQ86YW9 2145 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM90A7PA6NKC0 464 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 SH2D7A6NKC9 451 aaPredicted RBP4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM90A22PA8MWA6 464 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM90A12PA8MX19 464 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 FAM90A23PA8MXZ1 464 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 GGTLC3B5MD39 225 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 C9JAW5 83 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 RPL7P18124 248 aaKnown RBP4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 EFNB3Q15768 340 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 C3AR1Q16581 482 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 RRN3P1Q2M238 152 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 ANXA2RQ3ZCQ2 193 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 LY6G5CQ5SRR4 150 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 ZNF818PQ6ZRF7 136 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 NFE4Q86UQ8 179 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 ZNRF2Q8NHG8 242 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 LINC00479Q96M42 142 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 LINC01587Q99440 93 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 RASL11BQ9BPW5 248 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 HIGD1AQ9Y241 93 aa4.15□□□□□ -1.74
TMEM39A-206ENST00000473684 KIAA1549Q9HCM3 1950 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 A0A0G2JRQ6 117 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 TCRBV4S1A1TA0A5B7 111 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 C5orf67F2Z3F1 127 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 MPDU1O75352 247 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 P04436 131 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 ARL14EPLP0DKL9 152 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 ORM2P19652 201 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 CSN1S1P47710 185 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 CFHR3Q02985 330 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 FAM53BQ14153 422 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 Q6P435 159 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 C22orf39Q6P5X5 142 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 ZNF474Q6S9Z5 364 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.15□□□□□ -1.752e-12■■■□□ 18
TMEM39A-206ENST00000473684 PQLC2Q6ZP29 291 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 FAM231DQ6ZW35 169 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 DEFB123Q8N688 67 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 MAFAQ8NHW3 353 aaPredicted RBP4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 PIGCQ92535 297 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 ZNF747Q9BV97 191 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 KLF12Q9Y4X4 402 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 ATG2BQ96BY7 2078 aa4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 PHF3Q92576 2039 aaKnown RBP4.15□□□□□ -1.75
TMEM39A-206ENST00000473684 IGKV1-8A0A0C4DH67 115 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 ZNF840PA6NDX5 716 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 IGHG1P01857 330 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 ORM1P02763 201 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 CXCL10P02778 98 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 SP1P08047 785 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 LINC00694P0DN24 101 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 CRIP3Q6Q6R5 217 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 TMEM219Q86XT9 240 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 OR13A1Q8NGR1 328 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 DLX4Q92988 240 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 FAM131CQ96AQ9 280 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 HSD17B10Q99714 261 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 RNASE7Q9H1E1 156 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 FBXL15Q9H469 300 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 FGF22Q9HCT0 170 aa4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 NHP2Q9NX24 153 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 SLC25A10Q9UBX3 287 aaPredicted RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 TDRD6O60522 2096 aaKnown RBP4.14□□□□□ -1.75
TMEM39A-206ENST00000473684 A0A1B0GXF2 115 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms