RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 IDI2-AS1Q9NZ38 188 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 FBXO5Q9UKT4 447 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 EPDR1Q9UM22 224 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 CCDC88AQ3V6T2 1871 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 PCDH15Q96QU1 1955 aa1.28□□□□□ -2.2
PRPF40A-208ENST00000472760 HEATR5AQ86XA9 2040 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 J3QRK9 145 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 HAND1O96004 215 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 ZNF93P35789 620 aaPredicted RBP1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 RHOBP62745 196 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 DEFB115Q30KQ5 88 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 C12orf45Q8N5I9 185 aaPredicted RBP1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 SLC25A40Q8TBP6 338 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 SFT2D1Q8WV19 159 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 TVP23BQ9NYZ1 205 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 C22orf24Q9Y442 160 aa1.27□□□□□ -2.21
PRPF40A-208ENST00000472760 CCDC144AA2RUR9 1427 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 TRBV6-7A0A0A0MS04 114 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 TRAV3A0A0B4J244 114 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 C7orf71A4D174 169 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 DEFA3P59666 94 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 AP3S2P59780 193 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 CTAG1AP78358 180 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 Q6Q795 121 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 LCA10Q71F78 164 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 FAM19A2Q8N3H0 131 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 OR52L1Q8NGH7 329 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 OR8D4Q8NGM9 314 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 BTF3L4Q96K17 158 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 HIST1H2BLQ99880 126 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 KIFC1Q9BW19 673 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 HS3ST2Q9Y278 367 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
PRPF40A-208ENST00000472760 MYOFQ9NZM1 2061 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 CYB5BO43169 146 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 S100A6P06703 90 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 TSNQ15631 228 aaKnown RBP1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 BRMS1LQ5PSV4 323 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 OR10J5Q8NHC4 309 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 FAM172AQ8WUF8 416 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 PRAP1Q96NZ9 151 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 SIGMAR1Q99720 223 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 TLNRD1Q9H1K6 362 aa1.25□□□□□ -2.21
PRPF40A-208ENST00000472760 DOCK5Q9H7D0 1870 aa1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 HEATR5BQ9P2D3 2071 aa1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 TRAV12-1A0A0B4J245 112 aa1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 LYZL6O75951 148 aa1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 ANP32AP39687 249 aaKnown RBP1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 WFDC5Q8TCV5 224 aa1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 NMNAT1Q9HAN9 279 aaPredicted RBP1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 UTP11Q9Y3A2 253 aaKnown RBP1.24□□□□□ -2.21
PRPF40A-208ENST00000472760 COL4A5P29400 1685 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 COL6A6A6NMZ7 2263 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 INTS1Q8N201 2190 aaKnown RBP1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 MED1Q15648 1581 aaPredicted RBP1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 LOC110117498A0A087WWA1 95 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 TRBV6-8A0A0A6YYG3 113 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 OR7C1O76099 320 aaPredicted RBP1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 LIN52Q52LA3 116 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 LYRM7Q5U5X0 104 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 OR2T10Q8NGZ9 312 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 ZNF418Q8TF45 676 aaPredicted RBP1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 ADAT3Q96EY9 351 aaPredicted RBP1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 RNF122Q9H9V4 155 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 ACER3Q9NUN7 267 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 RASL12Q9NYN1 266 aa1.23□□□□□ -2.21
PRPF40A-208ENST00000472760 IGKV1-9A0A0C4DH69 117 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 ERP29P30040 261 aaKnown RBP1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 FADDQ13158 208 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 ESRGQ1W209 222 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 AKIRIN2Q53H80 203 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 LINC00301Q8NCQ3 95 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 TEX47Q8TBZ9 253 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 GNPDA2Q8TDQ7 276 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 OBSCN-AS1Q96MR7 158 aa1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 C6orf62Q9GZU0 229 aaPredicted RBP1.22□□□□□ -2.21
PRPF40A-208ENST00000472760 ANAPC1Q9H1A4 1944 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 CTXN2P0C2S0 81 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 EIF5AP63241 154 aaKnown RBP1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 REEP5Q00765 189 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 Q8N814 137 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 ITFG2Q969R8 447 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 ZFP30Q9Y2G7 519 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 ARL2BPQ9Y2Y0 163 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 FAM32AQ9Y421 112 aaKnown RBP1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 ECM29Q5VYK3 1845 aa1.21□□□□□ -2.22
PRPF40A-208ENST00000472760 ARFGEF3Q5TH69 2177 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 CLDN25C9JDP6 229 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 SRIP30626 198 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 SRP14P37108 136 aaKnown RBP1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 ERVS71-1P61550 626 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 DEFB113Q30KQ7 82 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 C1orf137Q5JT78 98 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 C3orf56Q8N813 242 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 SLAMF6Q96DU3 332 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 LINC00526Q96FQ7 95 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 BCL2L10Q9HD36 194 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 C14orf132Q9NPU4 83 aa1.2□□□□□ -2.22
PRPF40A-208ENST00000472760 IFNA6P05013 189 aa1.19□□□□□ -2.22
PRPF40A-208ENST00000472760 SERPINB9P50453 376 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms