RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 EFNA4P52798 201 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 LINC01554Q52M75 96 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 SPOPLQ6IQ16 392 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 MRPS26Q9BYN8 205 aaKnown RBP0.16□□□□□ -2.38
RBM39-228ENST00000471635 C20orf27Q9GZN8 174 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 DCSTAMPQ9H295 470 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 OR51V1Q9H2C8 321 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 EPDR1Q9UM22 224 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 V9GYY5 206 aaPredicted RBP0.16□□□□□ -2.38
RBM39-228ENST00000471635 ROBO3Q96MS0 1386 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 SBF1O95248 1867 aa0.16□□□□□ -2.38
RBM39-228ENST00000471635 ZNF106Q9H2Y7 1883 aaKnown RBP0.16□□□□□ -2.38
RBM39-228ENST00000471635 ECM29Q5VYK3 1845 aa0.15□□□□□ -2.38
RBM39-228ENST00000471635 FAM236DA0A1B0GTK5 79 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 A0A1W2PPM0 123 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 OR4C46A6NHA9 309 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 CCL25O15444 150 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 CRYZL1O95825 349 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 FAM236CP0DP71 79 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 NKX2-5P52952 324 aaPredicted RBP0.15□□□□□ -2.39
RBM39-228ENST00000471635 COTL1Q14019 142 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 CLECL1Q8IZS7 167 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 DDI1Q8WTU0 396 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 SLC35A3Q9Y2D2 325 aa0.15□□□□□ -2.39
RBM39-228ENST00000471635 APCP25054 2843 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 CASP8AP2Q9UKL3 1982 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 DNAL4O96015 105 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 OR4E1P0C645 316 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 SULT1A1P50225 295 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 MAGOHP61326 146 aaKnown RBP0.14□□□□□ -2.39
RBM39-228ENST00000471635 PSG9Q00887 426 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 BRMS1LQ5PSV4 323 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 TRAPPC6BQ86SZ2 158 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 WFDC5Q8TCV5 224 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 PATE1Q8WXA2 126 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 ADAT3Q96EY9 351 aaPredicted RBP0.14□□□□□ -2.39
RBM39-228ENST00000471635 SMR3AQ99954 134 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 UBAP1Q9NZ09 502 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 PLXND1Q9Y4D7 1925 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 CACNA1EQ15878 2313 aa0.14□□□□□ -2.39
RBM39-228ENST00000471635 PIRO00625 290 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 AHSA1O95433 338 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 TTRP02766 147 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 IFNA16P05015 189 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 S100A4P26447 101 aaKnown RBP0.13□□□□□ -2.39
RBM39-228ENST00000471635 ESRGQ1W209 222 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 C12orf45Q8N5I9 185 aaPredicted RBP0.13□□□□□ -2.39
RBM39-228ENST00000471635 LINC00301Q8NCQ3 95 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 OR8D4Q8NGM9 314 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 C8orf76Q96K31 380 aa0.13□□□□□ -2.39
RBM39-228ENST00000471635 NHP2Q9NX24 153 aaKnown RBP0.13□□□□□ -2.39
RBM39-228ENST00000471635 CHCHD2Q9Y6H1 151 aaPredicted RBP0.13□□□□□ -2.39
RBM39-228ENST00000471635 MED1Q15648 1581 aaPredicted RBP0.13□□□□□ -2.39
RBM39-228ENST00000471635 KIAA1549Q9HCM3 1950 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 TRBV6-4A0A1B0GX49 114 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 CLDN24A6NM45 220 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 CCL16O15467 120 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 CNIH1O95406 144 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 SERPINA6P08185 405 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 RBP1P09455 135 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 YPEL3P61236 119 aaPredicted RBP0.12□□□□□ -2.39
RBM39-228ENST00000471635 TSNQ15631 228 aaKnown RBP0.12□□□□□ -2.39
RBM39-228ENST00000471635 CCDC122Q5T0U0 273 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 LCA10Q71F78 164 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 CLDN22Q8N7P3 220 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 C4orf3Q8WVX3 66 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 DCUN1D1Q96GG9 259 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 PARD6GQ9BYG4 376 aaPredicted RBP0.12□□□□□ -2.39
RBM39-228ENST00000471635 VPS29Q9UBQ0 182 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 CYSLTR1Q9Y271 337 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 UTP11Q9Y3A2 253 aaKnown RBP0.12□□□□□ -2.39
RBM39-228ENST00000471635 TAF1LQ8IZX4 1826 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 MYO3BQ8WXR4 1341 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 FAT4Q6V0I7 4981 aa0.12□□□□□ -2.39
RBM39-228ENST00000471635 UNC13CQ8NB66 2214 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 A0A087X0T9 212 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 C7orf71A4D174 169 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 KLF7O75840 302 aaPredicted RBP0.11□□□□□ -2.39
RBM39-228ENST00000471635 ZNF682O95780 498 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 KRTAP2-3P0C7H8 128 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 C12orf74Q32Q52 190 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 FAM74A1Q5RGS3 127 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 LINC00322Q6ZN03 302 aaPredicted RBP0.11□□□□□ -2.39
RBM39-228ENST00000471635 GKN2Q86XP6 184 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 Q8IYB0 196 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 KRT222Q8N1A0 295 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 TEX47Q8TBZ9 253 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 ITFG2Q969R8 447 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 HIST1H2BLQ99880 126 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 KRTAP2-4Q9BYR9 128 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 KRTAP2-1Q9BYU5 128 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 C6orf62Q9GZU0 229 aaPredicted RBP0.11□□□□□ -2.39
RBM39-228ENST00000471635 TLNRD1Q9H1K6 362 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 BCL2L10Q9HD36 194 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 C14orf132Q9NPU4 83 aa0.11□□□□□ -2.39
RBM39-228ENST00000471635 HEATR1Q9H583 2144 aaKnown RBP0.11□□□□□ -2.39
RBM39-228ENST00000471635 C1orf196B1AJZ1 125 aa0.1□□□□□ -2.39
RBM39-228ENST00000471635 M0R036 132 aa0.1□□□□□ -2.39
RBM39-228ENST00000471635 GADD45GO95257 159 aa0.1□□□□□ -2.39
RBM39-228ENST00000471635 CASP1P29466 404 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms