RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 EHFQ9NZC4 300 aa6.31□□□□□ -1.4
XRN1-208ENST00000470537 XCL2Q9UBD3 114 aa6.31□□□□□ -1.4
XRN1-208ENST00000470537 RFNGQ9Y644 331 aa6.31□□□□□ -1.4
XRN1-208ENST00000470537 ABCA13Q86UQ4 5058 aa6.31□□□□□ -1.4
XRN1-208ENST00000470537 GSTZ1O43708 216 aaPredicted RBP6.3□□□□□ -1.4
XRN1-208ENST00000470537 CLN5O75503 358 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 PTHLHP12272 177 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 HSPA13P48723 471 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 EMP1P54849 157 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 SFXN4Q6P4A7 337 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 GSG1LQ6UXU4 331 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 ZNF705AQ6ZN79 300 aaPredicted RBP6.3□□□□□ -1.4
XRN1-208ENST00000470537 OR4X1Q8NH49 305 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 LGALS14Q8TCE9 139 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 Q8WTZ3 238 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 ZNF2Q9BSG1 426 aaPredicted RBP6.3□□□□□ -1.4
XRN1-208ENST00000470537 ENY2Q9NPA8 101 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 SCRT2Q9NQ03 307 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 SSR3Q9UNL2 185 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 RRP15Q9Y3B9 282 aaKnown RBP6.3□□□□□ -1.4
XRN1-208ENST00000470537 DNAH17Q9UFH2 4485 aa6.3□□□□□ -1.4
XRN1-208ENST00000470537 A0A1B0GU03 582 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 RPS10-NUDT3A0A1W2PQS6 291 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
XRN1-208ENST00000470537 INS-IGF2F8WCM5 200 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 H3BMM0 161 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 ZNF705DP0CH99 300 aaPredicted RBP6.29□□□□□ -1.4
XRN1-208ENST00000470537 ZNF705BP0CI00 300 aaPredicted RBP6.29□□□□□ -1.4
XRN1-208ENST00000470537 HTN3P15516 51 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 NUP62P37198 522 aaPredicted RBP6.29□□□□□ -1.4
XRN1-208ENST00000470537 OPRK1P41145 380 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 RPL5P46777 297 aaKnown RBP6.29□□□□□ -1.4
XRN1-208ENST00000470537 TSPAN5P62079 268 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 SPATA31B1PQ5VZV4 182 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 C6orf223Q8N319 242 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 SLC35G3Q8N808 338 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 OR5H2Q8NGV7 314 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 S100A16Q96FQ6 103 aaKnown RBP6.29□□□□□ -1.4
XRN1-208ENST00000470537 AUNIPQ9H7T9 357 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 TXNL4BQ9NX01 149 aaKnown RBP6.29□□□□□ -1.4
XRN1-208ENST00000470537 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
XRN1-208ENST00000470537 IGHV3OR16-12A0A075B7B8 117 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 HBE1P02100 147 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 SLPIP03973 132 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
XRN1-208ENST00000470537 ID1P41134 155 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 NKX2-1P43699 371 aaPredicted RBP6.28□□□□□ -1.4
XRN1-208ENST00000470537 RFX2P48378 723 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 ALDH3B2P48448 385 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 CCL18P55774 89 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 FAM222AQ5U5X8 452 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 SEC22AQ96IW7 307 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 CLUHP3Q96NS8 147 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
XRN1-208ENST00000470537 NBDYA0A0U1RRE5 68 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 SMIM30A4D0T7 59 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 FAM90A26D6RGX4 464 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 FCER2P06734 321 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 SLC25A4P12235 298 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 HLA-DRB4P13762 266 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 PSMB9P28065 219 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 YPEL3P61236 119 aaPredicted RBP6.27□□□□□ -1.41
XRN1-208ENST00000470537 DAD1P61803 113 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 RRN3P1Q2M238 152 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 IDNKQ5T6J7 187 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 SAMD13Q5VXD3 122 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 ETFRF1Q6IPR1 90 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 C16orf54Q6UWD8 224 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 CROCCP3Q8IVE0 287 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 FCGR1BQ92637 280 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 C7orf50Q9BRJ6 194 aaKnown RBP6.27□□□□□ -1.41
XRN1-208ENST00000470537 SCRT1Q9BWW7 348 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 YTHDF1Q9BYJ9 559 aaKnown RBP6.27□□□□□ -1.41
XRN1-208ENST00000470537 VCX3BQ9H321 246 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 PTTG2Q9NZH5 202 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 CACFD1Q9UGQ2 172 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 HLA-DRB4X5D2U9 266 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
XRN1-208ENST00000470537 PMP2P02689 132 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 SDC2P34741 201 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 AKR1C2P52895 323 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 PPP5CP53041 499 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 TAS2R20P59543 309 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 PHLDA2Q53GA4 152 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 TMEM88Q6PEY1 159 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 SIGLEC15Q6ZMC9 328 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 TBC1D26Q86UD7 250 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 NOXA1Q86UR1 476 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 OR1S2Q8NGQ3 325 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 GLMPQ8WWB7 406 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 MRGPRFQ96AM1 343 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 TMEM208Q9BTX3 173 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 SCPEP1Q9HB40 452 aa6.26□□□□□ -1.41
XRN1-208ENST00000470537 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
XRN1-208ENST00000470537 HSPG2P98160 4391 aa6.25□□□□□ -1.41
XRN1-208ENST00000470537 LOC102723971A0A1B0GUV8 181 aa6.25□□□□□ -1.41
XRN1-208ENST00000470537 EPM2AB3EWF7 344 aa6.25□□□□□ -1.41
XRN1-208ENST00000470537 IGKV1-17P01599 117 aa6.25□□□□□ -1.41
XRN1-208ENST00000470537 NAT1P18440 290 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms