RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
COL27A1-203ENST00000468565 FCN1O00602 326 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 CA2P00918 260 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 DUTP33316 252 aaKnown RBP11.25□□□□□ -0.61
COL27A1-203ENST00000468565 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 TMEM177Q53S58 311 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 SPSB3Q6PJ21 355 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 ZNF491Q8N8L2 437 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 HIPK2Q9H2X6 1198 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 SMCO4Q9NRQ5 59 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 AURKAIP1Q9NWT8 199 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-203ENST00000468565 RBFOX3A6NFN3 312 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 IGLV2-23P01705 113 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 PRB2P02812 416 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-203ENST00000468565 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-203ENST00000468565 KIAA0141Q14154 515 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-203ENST00000468565 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 RNF212Q495C1 297 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 ARL6IP6Q8N6S5 226 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 DDB2Q92466 427 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 HARBI1Q96MB7 349 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-203ENST00000468565 KLK15Q9H2R5 256 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 GSN-AS1Q9NRJ2 163 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 FOXA2Q9Y261 457 aaPredicted RBP11.25□□□□□ -0.61
COL27A1-203ENST00000468565 TNCP24821 2201 aa11.25□□□□□ -0.61
COL27A1-203ENST00000468565 A0A1W2PN81 502 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 SLC25A17O43808 307 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 CHRNA7P36544 502 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 RAB9AP51151 201 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 EGFEM1PQ0D2K5 195 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 ARL16Q0P5N6 197 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 FHL3Q13643 280 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 DEFB136Q30KP8 78 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 TMEM14EPQ6UXP3 125 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 HAPLN4Q86UW8 402 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 PPP1R27Q86WC6 154 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 ABHD5Q8WTS1 349 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 ARPC1AQ92747 370 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 DPF1Q92782 380 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
COL27A1-203ENST00000468565 TRAV1-1A0A0B4J248 108 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 CRYGBP07316 175 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 BRWD1-AS2P59051 145 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 CCL20P78556 96 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 SERF2P84101 59 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 RELQ04864 619 aaPredicted RBP11.23□□□□□ -0.61
COL27A1-203ENST00000468565 ATP6V1FQ16864 119 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 TPSG1Q9NRR2 321 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 LINC00473A8K010 186 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 M0R036 132 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 SOX15O60248 233 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 RBMXL2O75526 392 aaKnown RBP11.23□□□□□ -0.61
COL27A1-203ENST00000468565 SCAF4O95104 1147 aaKnown RBP11.23□□□□□ -0.61
COL27A1-203ENST00000468565 ZNF124Q15973 351 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 UNQ5815/PRO19632Q6UWF5 114 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 FAM103A1Q9BTL3 118 aaKnown RBP11.23□□□□□ -0.61
COL27A1-203ENST00000468565 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 WDR61Q9GZS3 305 aaKnown RBP11.23□□□□□ -0.61
COL27A1-203ENST00000468565 GNB4Q9HAV0 340 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 RPS10P5Q9NQ39 176 aa11.23□□□□□ -0.61
COL27A1-203ENST00000468565 LY86O95711 162 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 OR13C7P0DN81 318 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 KIR2DS2P43631 304 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 RAB5BP61020 215 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 FXYD3Q14802 87 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 SOHLH1Q5JUK2 328 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 ZNF506Q5JVG8 444 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 OR11H1Q8NG94 326 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 OSR1Q8TAX0 266 aaPredicted RBP11.22□□□□□ -0.61
COL27A1-203ENST00000468565 MRAPQ8TCY5 172 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 DTD1Q8TEA8 209 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
COL27A1-203ENST00000468565 OR4C12Q96R67 309 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 RARRES2Q99969 163 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 TIMM9Q9Y5J7 89 aa11.22□□□□□ -0.61
COL27A1-203ENST00000468565 MARCH11A6NNE9 402 aa11.21□□□□□ -0.61
COL27A1-203ENST00000468565 HPRT1P00492 218 aa11.21□□□□□ -0.61
COL27A1-203ENST00000468565 FOLR2P14207 255 aa11.21□□□□□ -0.61
COL27A1-203ENST00000468565 RHEBQ15382 184 aa11.21□□□□□ -0.61
COL27A1-203ENST00000468565 OR8G2PQ6IF36 304 aa11.21□□□□□ -0.61
COL27A1-203ENST00000468565 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.61
COL27A1-203ENST00000468565 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.61
COL27A1-203ENST00000468565 UBE2L5PA0A1B0GUS4 154 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 SRRM4A7MD48 611 aaKnown RBP11.21□□□□□ -0.62
COL27A1-203ENST00000468565 CEBPZOSA8MTT3 80 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.62
COL27A1-203ENST00000468565 FCGR3BO75015 233 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 HSPB1P04792 205 aaKnown RBP11.21□□□□□ -0.62
COL27A1-203ENST00000468565 KRTAP10-11P60412 298 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 RAB4BP61018 213 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 ERVK-16P61578 105 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 SSBP2P81877 361 aaPredicted RBP11.21□□□□□ -0.62
COL27A1-203ENST00000468565 HAGHQ16775 308 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 VMA21Q3ZAQ7 101 aa11.21□□□□□ -0.62
COL27A1-203ENST00000468565 TMEM41BQ5BJD5 291 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms