RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 TRIM77I1YAP6 450 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 I3L2K1 104 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 AP4M1O00189 453 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 CFDP00746 253 aaPredicted RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 IGHV4-59P01825 116 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 FAM157CP0CG43 387 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 AREGP15514 252 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 ATP6V0CP27449 155 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 PPIFP30405 207 aaKnown RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 RPL29P47914 159 aaKnown RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 SULT1A2P50226 295 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 MFAP2P55001 183 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 NDPQ00604 133 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 RAB31Q13636 194 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 SPINK9Q5DT21 86 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 FAM209BQ5JX69 171 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 C10orf55Q5SWW7 151 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 SLC25A24Q6NUK1 477 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 RBMS3Q6XE24 437 aaKnown RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 THAP8Q8NA92 274 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 OR4X1Q8NH49 305 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 SCGB1C1Q8TD33 95 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 VN1R17PQ8TDU5 208 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 ZNF418Q8TF45 676 aaPredicted RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 TAF15Q92804 592 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS41-211ENST00000466017 SAT2Q96F10 170 aaPredicted RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 HSPB9Q9BQS6 159 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 PRSS22Q9GZN4 317 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 SLC25A32Q9H2D1 315 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 GAR1Q9NY12 217 aaKnown RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 UBQLN2Q9UHD9 624 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 NAV3Q8IVL0 2385 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 ANK3Q12955 4377 aaKnown RBP4.28□□□□□ -1.72
VPS41-211ENST00000466017 ABCA12Q86UK0 2595 aa4.28□□□□□ -1.72
VPS41-211ENST00000466017 POLQO75417 2590 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 TRAV41A0A0B4J266 112 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 MDFIC2A0A1B0GVS7 189 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 C17orf112F2Z3M2 114 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 K7EIM0 57 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 ATP6V0E1O15342 81 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 MBP02144 154 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 OPRK1P41145 380 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 NPBWR1P48145 328 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
VPS41-211ENST00000466017 PLP1P60201 277 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 SELENOTP62341 195 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 GNB1P62873 340 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 BLCAPP62952 87 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 CFHR3Q02985 330 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 GAMTQ14353 236 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 LY6EQ16553 131 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 CLLU1Q5K131 121 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 PXDC1Q5TGL8 231 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 OR8G2PQ6IF36 304 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 UNQ5815/PRO19632Q6UWF5 114 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 CLEC9AQ6UXN8 241 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 DPPA3Q6W0C5 159 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 SLC35E3Q7Z769 313 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 COMMD1Q8N668 190 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 TMEM217Q8N7C4 229 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 SIGLECL1Q8N7X8 197 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 LFNGQ8NES3 379 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 LYPD6BQ8NI32 183 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 ABHD5Q8WTS1 349 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 USMG5Q96IX5 58 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 SLC35E1Q96K37 410 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 CXorf58Q96LI9 332 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 TRGV9Q99603 122 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 C19orf24Q9BVV8 132 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 NPFFR1Q9GZQ6 430 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 C16orf95Q9H693 158 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 FNDC4Q9H6D8 234 aaPredicted RBP4.27□□□□□ -1.73
VPS41-211ENST00000466017 KCNIP2Q9NS61 270 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 MED9Q9NWA0 146 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 FBXO7Q9Y3I1 522 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 UNC79Q9P2D8 2635 aa4.27□□□□□ -1.73
VPS41-211ENST00000466017 CREBBPQ92793 2442 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 A0A087WWL8 130 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 TRBV7-1A0A0A6YYK4 115 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 LINC01548A6NM66 108 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 CRLF1O75462 422 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 CLN5O75503 358 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 MT-CO2P00403 227 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 IGHG4P01861 327 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 DEFA4P12838 97 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 SRD5A1P18405 259 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 MFAP4P55083 255 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 HILS1P60008 231 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 YPEL3P61236 119 aaPredicted RBP4.26□□□□□ -1.73
VPS41-211ENST00000466017 CLINT1Q14677 625 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 NDUFA5Q16718 116 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 BTNL8Q6UX41 500 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 SLC16A13Q7RTY0 426 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 TMEM219Q86XT9 240 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 FAM223AQ8IWN6 122 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 RNF152Q8N8N0 203 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 ZNF709Q8N972 641 aa4.26□□□□□ -1.73
VPS41-211ENST00000466017 NECAP1Q8NC96 275 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms