RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 HLA-DMBP28068 263 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 RAB5CP51148 216 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 MEF2BQ02080 365 aaPredicted RBP2.36□□□□□ -2.03
ITGB1-208ENST00000464001 EMX2Q04743 252 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 MSMO1Q15800 293 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 VMA21Q3ZAQ7 101 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 C1orf140Q5VVS0 124 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 C4orf22Q6V702 233 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 C16orf47Q6ZP98 133 aaPredicted RBP2.36□□□□□ -2.03
ITGB1-208ENST00000464001 SAXO1Q8IYX7 474 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 CYB561D1Q8N8Q1 229 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 OR2T10Q8NGZ9 312 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 OR4C6Q8NH72 309 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 HIST1H2BAQ96A08 127 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 ISOC1Q96CN7 298 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 PRADC1Q9BSG0 188 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 YIPF3Q9GZM5 350 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 TUBA4BQ9H853 241 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 OR5AC2Q9NZP5 309 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 CKLFQ9UBR5 152 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 RNF11Q9Y3C5 154 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 U3KQK5 164 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 MYH1P12882 1939 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 SYNJ1O43426 1573 aa2.36□□□□□ -2.03
ITGB1-208ENST00000464001 UHRF1BP1LA0JNW5 1464 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 TRBV24-1A0A075B6N3 115 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 A0A0B4J2C4 111 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 C9orf170A2RU37 121 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 C19orf71A6NCJ1 209 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 ARRDC5A6NEK1 342 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 FABP5P3A8MUU1 101 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 A8MUU9 505 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 M0R2Z0 102 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 SH2D1AO60880 128 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 DPM2O94777 84 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 LHBP01229 141 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 IFNGP01579 166 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 MT-ND4LP03901 98 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 CXCL1P09341 107 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 UCHL1P09936 223 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 P0DMU3 169 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 FAM231AP0DMU4 169 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 FAM231CP0DMU5 169 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 SLC25A16P16260 332 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 CRHBPP24387 322 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 RPL27AP46776 148 aaKnown RBP2.35□□□□□ -2.03
ITGB1-208ENST00000464001 AKR1C2P52895 323 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 MAXP61244 160 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 NCS1P62166 190 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 RPS25P62851 125 aaKnown RBP2.35□□□□□ -2.03
ITGB1-208ENST00000464001 RHOGP84095 191 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 KISS1Q15726 138 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 Q5W150 140 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 ZFP2Q6ZN57 461 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 ZNF767PQ75MW2 155 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 ARL11Q969Q4 196 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 RNF5Q99942 180 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 LINC00470Q9BZP3 86 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 TMEM133Q9H2Q1 129 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 C16orf95Q9H693 158 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 NAT8BQ9UHF3 227 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 MCTS1Q9ULC4 181 aaKnown RBP2.35□□□□□ -2.03
ITGB1-208ENST00000464001 TNFSF18Q9UNG2 199 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 KDM5CP41229 1560 aa2.35□□□□□ -2.03
ITGB1-208ENST00000464001 FGD6Q6ZV73 1430 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 ERBINQ96RT1 1412 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 SCN9AQ15858 1988 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 ARHGEF28Q8N1W1 1705 aaKnown RBP2.34□□□□□ -2.03
ITGB1-208ENST00000464001 AKAP12Q02952 1782 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 IGKV1D-37A0A075B6S9 117 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 MDFIC2A0A1B0GVS7 189 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 A0A1B0GW54 56 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 A8MWP6 167 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 FAM25AB3EWG3 89 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 FAM25CB3EWG5 89 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 FAM25GB3EWG6 89 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 LY6HO94772 140 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 IGKV1-16P04430 117 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 S100A4P26447 101 aaKnown RBP2.34□□□□□ -2.03
ITGB1-208ENST00000464001 TEX29Q8N6K0 151 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 CNEP1R1Q8N9A8 125 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 OR51A4Q8NGJ6 313 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 TERB2Q8NHR7 220 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 PPTC7Q8NI37 304 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 C14orf144Q96I85 54 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 SLC39A9Q9NUM3 307 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 COA4Q9NYJ1 87 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 NAT8Q9UHE5 227 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 GNG8Q9UK08 70 aa2.34□□□□□ -2.03
ITGB1-208ENST00000464001 MED1Q15648 1581 aaPredicted RBP2.34□□□□□ -2.03
ITGB1-208ENST00000464001 CUL7Q14999 1698 aa2.34□□□□□ -2.04
ITGB1-208ENST00000464001 CEP164Q9UPV0 1460 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 SLX4Q8IY92 1834 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 TOPBP1Q92547 1522 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 K7ERJ3 54 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 K7ERU9 68 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 NDUFB2O95178 105 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 NAPSAO96009 420 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms