RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 TMEM17Q86X19 198 aa5.35□□□□□ -1.55
SMC3-202ENST00000462899 PINX1Q96BK5 328 aaKnown RBP5.35□□□□□ -1.55
SMC3-202ENST00000462899 SEC22AQ96IW7 307 aa5.35□□□□□ -1.55
SMC3-202ENST00000462899 TSC22D3Q99576 134 aa5.35□□□□□ -1.55
SMC3-202ENST00000462899 ATG101Q9BSB4 218 aa5.35□□□□□ -1.55
SMC3-202ENST00000462899 C8orf4Q9NR00 106 aa5.35□□□□□ -1.55
SMC3-202ENST00000462899 LOC102723971A0A1B0GUV8 181 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 PLAC8L1A1L4L8 177 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 A8MTW9 85 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 PTGES3LE9PB15 166 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 SNAPC5O75971 98 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 SCGNO76038 276 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 RAB3BP20337 219 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 ARPC4P59998 168 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 DEFB1P60022 68 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 DAD1P61803 113 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 ZNF79Q15937 498 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 C10orf67Q8IYJ2 551 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 OR4X1Q8NH49 305 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 LGALS14Q8TCE9 139 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 FRZBQ92765 325 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 MOB3AQ96BX8 217 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 UPK3BQ9BT76 320 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 SAV1Q9H4B6 383 aaPredicted RBP5.34□□□□□ -1.55
SMC3-202ENST00000462899 DUSP21Q9H596 190 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 NRN1Q9NPD7 142 aa5.34□□□□□ -1.55
SMC3-202ENST00000462899 FAM212BQ9NTI7 297 aaPredicted RBP5.34□□□□□ -1.55
SMC3-202ENST00000462899 IGHV3OR16-12A0A075B7B8 117 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 A0A1W2PPQ1 181 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 C9orf118A6NHY6 69 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 SOCS3O14543 225 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 CASQ2O14958 399 aaPredicted RBP5.33□□□□□ -1.56
SMC3-202ENST00000462899 HNRNPCP07910 306 aaKnown RBP eCLIP5.33□□□□□ -1.56
SMC3-202ENST00000462899 P0C879 139 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 HSMCR30P0CW71 290 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 RNASE2P10153 161 aaKnown RBP5.33□□□□□ -1.56
SMC3-202ENST00000462899 HOXA1P49639 335 aaPredicted RBP5.33□□□□□ -1.56
SMC3-202ENST00000462899 AP2S1P53680 142 aaPredicted RBP5.33□□□□□ -1.56
SMC3-202ENST00000462899 FXYD7P58549 80 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 HSPE1P61604 102 aaKnown RBP5.33□□□□□ -1.56
SMC3-202ENST00000462899 SNRPD3P62318 126 aaKnown RBP5.33□□□□□ -1.56
SMC3-202ENST00000462899 USF2Q15853 346 aaPredicted RBP5.33□□□□□ -1.56
SMC3-202ENST00000462899 BSXQ3C1V8 233 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 TTC32Q5I0X7 151 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 DHRS11Q6UWP2 260 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 TPRA1Q86W33 373 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 OR5AP2Q8NGF4 316 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 BORCS5Q969J3 196 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 SLC25A38Q96DW6 304 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 MGLLQ99685 303 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 FXYD6Q9H0Q3 95 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 SLC35B3Q9H1N7 401 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 Q9H8V8 135 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 NDUFB11Q9NX14 153 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 ANAPC10Q9UM13 185 aa5.33□□□□□ -1.56
SMC3-202ENST00000462899 TRDV1A0A1B0GX56 115 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 LYRM9A8MSI8 78 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 BUB3O43684 328 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 HBE1P02100 147 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 IGLC1P0CG04 106 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 FUSP35637 526 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMC3-202ENST00000462899 RPL5P46777 297 aaKnown RBP5.32□□□□□ -1.56
SMC3-202ENST00000462899 EIF2B2P49770 351 aaKnown RBP5.32□□□□□ -1.56
SMC3-202ENST00000462899 PAX9P55771 341 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 CCL18P55774 89 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 KRTAP10-1P60331 282 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 TIGITQ495A1 244 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 LCE1DQ5T752 114 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 SIGLEC15Q6ZMC9 328 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 FOXI2Q6ZQN5 318 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 SSX7Q7RTT5 188 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 C17orf77Q96MU5 243 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 RHBDL2Q9NX52 303 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 MDFICQ9P1T7 246 aa5.32□□□□□ -1.56
SMC3-202ENST00000462899 TNXBP22105 4242 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 RPS10-NUDT3A0A1W2PQS6 291 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 SMIM30A4D0T7 59 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 KRTAP29-1A8MX34 341 aaPredicted RBP5.31□□□□□ -1.56
SMC3-202ENST00000462899 CORTO00230 105 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 NUDT3O95989 172 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 MYL9P24844 172 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 TSPOP30536 169 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 ERHP84090 104 aaKnown RBP5.31□□□□□ -1.56
SMC3-202ENST00000462899 RRN3P1Q2M238 152 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 SPINK9Q5DT21 86 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 AMTNQ6UX39 209 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 NARS2Q96I59 477 aaKnown RBP5.31□□□□□ -1.56
SMC3-202ENST00000462899 WDR12Q9GZL7 423 aaKnown RBP5.31□□□□□ -1.56
SMC3-202ENST00000462899 CCDC90BQ9GZT6 254 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 GOLT1BQ9Y3E0 138 aa5.31□□□□□ -1.56
SMC3-202ENST00000462899 A0A0A6YYH2 397 aa5.3□□□□□ -1.56
SMC3-202ENST00000462899 A0A0B4J293 547 aa5.3□□□□□ -1.56
SMC3-202ENST00000462899 A6NJ64 397 aa5.3□□□□□ -1.56
SMC3-202ENST00000462899 GPR31O00270 319 aa5.3□□□□□ -1.56
SMC3-202ENST00000462899 CRXO43186 299 aaPredicted RBP5.3□□□□□ -1.56
SMC3-202ENST00000462899 RGS10O43665 173 aa5.3□□□□□ -1.56
SMC3-202ENST00000462899 IGKV3-20P01619 116 aa5.3□□□□□ -1.56
SMC3-202ENST00000462899 SMR3BP02814 79 aaPredicted RBP5.3□□□□□ -1.56
SMC3-202ENST00000462899 PRM2P04554 102 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms