RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 HSPE1P61604 102 aaKnown RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 RHEBQ15382 184 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 SURF2Q15527 256 aaPredicted RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 AADACL3Q5VUY0 350 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 GOLT1AQ6ZVE7 132 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 GRINAQ7Z429 371 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 COA5Q86WW8 74 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 EXOC3-AS1Q8N2X6 119 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 FAM24BQ8N5W8 94 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 OR11H6Q8NGC7 330 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 SLC25A40Q8TBP6 338 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 MBD3L1Q8WWY6 194 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 LZICQ8WZA0 190 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 BORCS5Q969J3 196 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 SCGB3A1Q96QR1 104 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 AIF1LQ9BQI0 150 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 PBDC1Q9BVG4 233 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 MAP1LC3BQ9GZQ8 125 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 C11orf68Q9H3H3 251 aaKnown RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 GSKIPQ9P0R6 139 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 PYCARDQ9ULZ3 195 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 PTPRSQ13332 1948 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 MAPKBP1O60336 1514 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 ARHGEF10O15013 1369 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 SHROOM2Q13796 1616 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 KIAA2026Q5HYC2 2103 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 POLA1P09884 1462 aaPredicted RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 ABCC10Q5T3U5 1492 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 DIP2BQ9P265 1576 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 HECW2Q9P2P5 1572 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 NCKAP5O14513 1909 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 SOGA1O94964 1423 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 A0A0D9SG52 128 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 A0A1W2PRE2 83 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 PIRO00625 290 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 ZNF737O75373 536 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 PGLYRP1O75594 196 aaPredicted RBP1.17□□□□□ -2.22
HDAC6-212ENST00000461608 TCL1BO95988 128 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 C1QBP02746 253 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 TRGC1P0CF51 173 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 SMIM10L2AP0DMW4 78 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 SMIM10L2BP0DMW5 78 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 RPS4Y1P22090 263 aaKnown RBP1.17□□□□□ -2.22
HDAC6-212ENST00000461608 PHBP35232 272 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 ELOBQ15370 118 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 C12orf74Q32Q52 190 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM155Q4W5P6 130 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM128Q5BJH2 165 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 AKR1C8PQ5T2L2 129 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 Q6ZRN7 208 aaPredicted RBP1.17□□□□□ -2.22
HDAC6-212ENST00000461608 DEFB128Q7Z7B8 93 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 OOSP2Q86WS3 158 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 GDPD1Q8N9F7 314 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 ZNF439Q8NDP4 499 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 SPACA4Q8TDM5 124 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 GNPDA2Q8TDQ7 276 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 CT55Q8WUE5 264 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 C2orf50Q96LR7 162 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 TSPAN32Q96QS1 320 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 GPER1Q99527 375 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 HSPB9Q9BQS6 159 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 NAA38Q9BRA0 125 aaKnown RBP1.17□□□□□ -2.22
HDAC6-212ENST00000461608 EFCAB11Q9BUY7 163 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 CCDC90BQ9GZT6 254 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 C6orf62Q9GZU0 229 aaPredicted RBP1.17□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM138Q9NPI0 162 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 MED11Q9P086 117 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 SSR3Q9UNL2 185 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 BAIAP2Q9UQB8 552 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 CPDO75976 1380 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 SCAF11Q99590 1463 aaKnown RBP1.17□□□□□ -2.22
HDAC6-212ENST00000461608 DOCK10Q96BY6 2186 aa1.17□□□□□ -2.22
HDAC6-212ENST00000461608 PIK3C2GO75747 1445 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 TOP2BQ02880 1626 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ABCA5Q8WWZ7 1642 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 PRORSD1PA6NEY8 169 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 DPRXA6NFQ7 191 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 H7C1C5 153 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 J3QRK9 145 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ORC5O43913 435 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 CST8O60676 142 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 BANF1O75531 89 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ZNF682O95780 498 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 PPBPP02775 128 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 HTR1AP08908 422 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 OR10J4P0C629 311 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ZNF705BP0CI00 300 aaPredicted RBP1.16□□□□□ -2.22
HDAC6-212ENST00000461608 SCGB1A1P11684 91 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ATP5G3P48201 142 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 LCN6P62502 163 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 LTC4SQ16873 150 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 CCDC58Q4VC31 144 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM78Q5T7P6 136 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 FAM27BQ5VT28 67 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 SAMD13Q5VXD3 122 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 AAED1Q7RTV5 226 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 LINC00471Q8N535 108 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 ZC2HC1AQ96GY0 325 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 PFDN5Q99471 154 aa1.16□□□□□ -2.22
HDAC6-212ENST00000461608 YIPF3Q9GZM5 350 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms