RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 H3BMM0 161 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 HPGDSO60760 199 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 SCGB2A1O75556 95 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 CD3DP04234 171 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 HNRNPCP07910 306 aaKnown RBP eCLIP8.84□□□□□ -0.99
GPNMB-204ENST00000459927 IGLC1P0CG04 106 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 UCP1P25874 307 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 HTR2BP41595 481 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 HOXA1P49639 335 aaPredicted RBP8.84□□□□□ -0.99
GPNMB-204ENST00000459927 NUTF2P61970 127 aaKnown RBP8.84□□□□□ -0.99
GPNMB-204ENST00000459927 TRIM16LQ309B1 348 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 LGALS9BQ3B8N2 356 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 AARDQ4LEZ3 155 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 OR1S2Q8NGQ3 325 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 ZFAND1Q8TCF1 268 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 NDUFAF3Q9BU61 184 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 C1QTNF4Q9BXJ3 329 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 COPZ2Q9P299 210 aa8.84□□□□□ -0.99
GPNMB-204ENST00000459927 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 RPS10-NUDT3A0A1W2PQS6 291 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 BUB3O43684 328 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 CDS2O95674 445 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 AMBPP02760 352 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 C2orf83Q53S99 150 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 RNASE10Q5GAN6 216 aaKnown RBP8.83□□□□□ -1
GPNMB-204ENST00000459927 ARRDC1Q8N5I2 433 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 GLYATL2Q8WU03 294 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 NEU1Q99519 415 aa8.83□□□□□ -1
GPNMB-204ENST00000459927 HEYLQ9NQ87 328 aaPredicted RBP8.83□□□□□ -1
GPNMB-204ENST00000459927 SMIM9A6NGZ8 99 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 FAM90A26D6RGX4 464 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 B3GALNT1O75752 331 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 NXPH3O95157 252 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 SPART-AS1P0CW21 52 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 SLC25A4P12235 298 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 OR10J1P30954 320 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 RND2P52198 227 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 NCS1P62166 190 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 SNRPD3P62318 126 aaKnown RBP8.82□□□□□ -1
GPNMB-204ENST00000459927 USF2Q15853 346 aaPredicted RBP8.82□□□□□ -1
GPNMB-204ENST00000459927 ZNF705AQ6ZN79 300 aaPredicted RBP8.82□□□□□ -1
GPNMB-204ENST00000459927 FAM219AQ8IW50 185 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 SELENOHQ8IZQ5 122 aaKnown RBP8.82□□□□□ -1
GPNMB-204ENST00000459927 OR52I2Q8NH67 350 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 RNASEH2CQ8TDP1 164 aaKnown RBP8.82□□□□□ -1
GPNMB-204ENST00000459927 NPIPB3Q92617 1050 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 GPR146Q96CH1 333 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 MTFP1Q9UDX5 166 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 PKHD1P08F94 4074 aa8.82□□□□□ -1
GPNMB-204ENST00000459927 A0A087WXM4 84 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 TEX13DA0A0J9YY54 714 aaPredicted RBP8.81□□□□□ -1
GPNMB-204ENST00000459927 IFNA10P01566 189 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 RD3LP0DJH9 198 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 RORCP51449 518 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 VBP1P61758 197 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 RNASE12Q5GAN4 147 aaKnown RBP8.81□□□□□ -1
GPNMB-204ENST00000459927 CCDC71LQ8N9Z2 235 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 OR4D10Q8NGI6 311 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 OR13C8Q8NGS7 320 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 MARCH1Q8TCQ1 289 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 TMEM170AQ8WVE7 144 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 ABHD1Q96SE0 405 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 RTBDNQ9BSG5 229 aaPredicted RBP8.81□□□□□ -1
GPNMB-204ENST00000459927 FUNDC2Q9BWH2 189 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 TMEM222Q9H0R3 208 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 NRN1Q9NPD7 142 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 PLA2G2EQ9NZK7 142 aa8.81□□□□□ -1
GPNMB-204ENST00000459927 ZNF705FA8MVS1 300 aaPredicted RBP8.8□□□□□ -1
GPNMB-204ENST00000459927 FAM25AB3EWG3 89 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 FAM25CB3EWG5 89 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 FAM25GB3EWG6 89 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 IFNA21P01568 189 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 CD74P04233 296 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 IL4P05112 153 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 ZNF705DP0CH99 300 aaPredicted RBP8.8□□□□□ -1
GPNMB-204ENST00000459927 ZNF705BP0CI00 300 aaPredicted RBP8.8□□□□□ -1
GPNMB-204ENST00000459927 HLA-DRB4P13762 266 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 TBPP20226 339 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 NKX2-1P43699 371 aaPredicted RBP8.8□□□□□ -1
GPNMB-204ENST00000459927 ETFRF1Q6IPR1 90 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 MZT2AQ6P582 158 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 SIGLEC15Q6ZMC9 328 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 Q6ZR54 194 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 TMEM229BQ8NBD8 167 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 RNASE11Q8TAA1 199 aaKnown RBP8.8□□□□□ -1
GPNMB-204ENST00000459927 LHFPL5Q8TAF8 219 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 FAM210BQ96KR6 192 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 HLA-DRB4X5D2U9 266 aa8.8□□□□□ -1
GPNMB-204ENST00000459927 TMEM189A5PLL7 270 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 CEBPZOSA8MTT3 80 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 RAB3DO95716 219 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 TOMM40O96008 361 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 OR5AC1P0C628 307 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 PSG1P11464 419 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 EMP1P54849 157 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 FXYD7P58549 80 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 SCGB2B2Q4G0G5 96 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 GDF5OSQ5U4N7 250 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 VCX3AQ9NNX9 186 aa8.79□□□□□ -1
GPNMB-204ENST00000459927 IGKV3-20P01619 116 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms