RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SAP30O75446 220 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 PAQR4Q8N4S7 273 aaPredicted RBP16.29■□□□□ 0.2
SNX27-204ENST00000458013 RNF182Q8N6D2 247 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 PRTN3P24158 256 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 CSRP2Q16527 193 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 PLXNA1Q9UIW2 1896 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 ARID2Q68CP9 1835 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 TCRAP04437 139 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 BRD3OSQ6XYD6 125 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 TIMP3P35625 211 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 LY6G6FQ5SQ64 297 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 VWCEQ96DN2 955 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 UNC13CQ8NB66 2214 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 CSRP3P50461 194 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 LTBP4Q8N2S1 1624 aa16.28■□□□□ 0.2
SNX27-204ENST00000458013 NYNRINQ9P2P1 1898 aaKnown RBP16.28■□□□□ 0.2
SNX27-204ENST00000458013 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.27■□□□□ 0.2
SNX27-204ENST00000458013 METRNQ9UJH8 293 aa16.27■□□□□ 0.2
SNX27-204ENST00000458013 SPTBP11277 2137 aa16.27■□□□□ 0.2
SNX27-204ENST00000458013 BRWD1Q9NSI6 2320 aa16.27■□□□□ 0.2
SNX27-204ENST00000458013 ANAPC13Q9BS18 74 aa16.27■□□□□ 0.2
SNX27-204ENST00000458013 KLF17Q5JT82 389 aaPredicted RBP16.27■□□□□ 0.19
SNX27-204ENST00000458013 UBE2DNLQ8IWF7 75 aa16.27■□□□□ 0.19
SNX27-204ENST00000458013 ZNF625Q96I27 306 aaPredicted RBP16.27■□□□□ 0.19
SNX27-204ENST00000458013 PRDM13Q9H4Q3 707 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 A0A087WWC5 75 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 hDV102S1A0JD36 115 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 PMS2P5A8MQ11 134 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 IGHV1-46P01743 117 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 Q8TAT8 98 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 ZNF581Q9P0T4 197 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 SMKR1H3BMG3 65 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H4AP62805 103 aaKnown RBP16.26■□□□□ 0.19
SNX27-204ENST00000458013 PAX8Q06710 450 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 DEFB121Q5J5C9 76 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 S100A7L2Q5SY68 101 aa16.26■□□□□ 0.19
SNX27-204ENST00000458013 TMEM8BA6NDV4 472 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 TMEM249Q2WGJ8 235 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 ASCL4Q6XD76 172 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 TMEM144Q7Z5S9 345 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 OR2K2Q8NGT1 345 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 D6R8Y8 96 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 YPEL1O60688 119 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 YPEL2Q96QA6 119 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BKO60814 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BJP06899 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BOP23527 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BBP33778 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BDP58876 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BCP62807 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 SRSF6Q13247 344 aaKnown RBP16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST2H2BEQ16778 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.25■□□□□ 0.19
SNX27-204ENST00000458013 RNF144BQ7Z419 303 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BHQ93079 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BNQ99877 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 HIST1H2BMQ99879 126 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 C5orf30Q96GV9 206 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 C5orf63A6NC05 138 aa16.25■□□□□ 0.19
SNX27-204ENST00000458013 ZNF688P0C7X2 276 aa16.24■□□□□ 0.19
SNX27-204ENST00000458013 SLC25A2Q9BXI2 301 aa16.24■□□□□ 0.19
SNX27-204ENST00000458013 PRSS22Q9GZN4 317 aa16.24■□□□□ 0.19
SNX27-204ENST00000458013 UBE2E2Q96LR5 201 aa16.24■□□□□ 0.19
SNX27-204ENST00000458013 CITED2Q99967 270 aaPredicted RBP16.24■□□□□ 0.19
SNX27-204ENST00000458013 CST9LQ9H4G1 147 aa16.24■□□□□ 0.19
SNX27-204ENST00000458013 TMEM200BQ69YZ2 307 aa16.24■□□□□ 0.19
SNX27-204ENST00000458013 ACTL10Q5JWF8 245 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 THSD7AQ9UPZ6 1657 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 LILRA1O75019 489 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 CACNG8Q8WXS5 425 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 CYSLTR1Q9Y271 337 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 RCHY1Q96PM5 261 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 IGKV1-12A0A0C4DH73 117 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 IGKV1D-12P01611 117 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 DUTP33316 252 aaKnown RBP16.23■□□□□ 0.19
SNX27-204ENST00000458013 ZNF138P52744 262 aa16.23■□□□□ 0.19
SNX27-204ENST00000458013 TNS1Q9HBL0 1735 aaKnown RBP16.23■□□□□ 0.19
SNX27-204ENST00000458013 LY6HO94772 140 aa16.22■□□□□ 0.19
SNX27-204ENST00000458013 STAG3L3P0CL85 134 aa16.22■□□□□ 0.19
SNX27-204ENST00000458013 IGKV1-27A0A075B6S5 117 aa16.22■□□□□ 0.19
SNX27-204ENST00000458013 SAMD5Q5TGI4 173 aa16.22■□□□□ 0.19
SNX27-204ENST00000458013 RNASE6Q93091 150 aaKnown RBP16.22■□□□□ 0.19
SNX27-204ENST00000458013 CCL1P22362 96 aa16.22■□□□□ 0.19
SNX27-204ENST00000458013 FOXD3Q9UJU5 478 aaPredicted RBP16.22■□□□□ 0.19
SNX27-204ENST00000458013 M0R2P5 195 aa16.22■□□□□ 0.19
SNX27-204ENST00000458013 MRPL14Q6P1L8 145 aaKnown RBP16.22■□□□□ 0.19
SNX27-204ENST00000458013 C8orf46Q8TAG6 207 aa16.22■□□□□ 0.19
SNX27-204ENST00000458013 IGHV2-26A0A0B4J1V2 119 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 PVRIGQ6DKI7 326 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 ORAOV1Q8WV07 137 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 ZNF48Q96MX3 618 aaPredicted RBP16.21■□□□□ 0.19
SNX27-204ENST00000458013 MGST2Q99735 147 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 SLC25A39Q9BZJ4 359 aaPredicted RBP16.21■□□□□ 0.19
SNX27-204ENST00000458013 ERCC8Q13216 396 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 KLHDC3Q9BQ90 382 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 TRAV9-2A0A087WT02 112 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 C15orf32Q32M92 178 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 LYZL1Q6UWQ5 148 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 LYPD3O95274 346 aa16.21■□□□□ 0.19
SNX27-204ENST00000458013 LINC00477Q96M19 166 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms