RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 LOXHD1Q8IVV2 1947 aa4.26□□□□□ -1.73
VPS41-209ENST00000457055 TENM4Q6N022 2769 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 SCN10AQ9Y5Y9 1956 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 MYO18BQ8IUG5 2567 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 VWA8A3KMH1 1905 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 FAM236AA0A1B0GUQ0 79 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 FAM236BA0A1B0GV22 79 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 A0A1B0GXF2 115 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 C7orf66A4D0T2 115 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 ARRDC5A6NEK1 342 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 F8W1H4 67 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 LOC400499M0QZD8 3231 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 GEMIN2O14893 280 aaKnown RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 AGPAT2O15120 278 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 SLC37A4O43826 429 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 NDUFS7O75251 213 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 SFT2D2O95562 160 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 CRYGSP22914 178 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 NFYAP23511 347 aaPredicted RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 SLC25A1P53007 311 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 FOXA3P55318 350 aaPredicted RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 SEC61A1P61619 476 aaKnown RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 PPP1CAP62136 330 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 TWIST1Q15672 202 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 UBE2SQ16763 222 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 C9orf153Q5TBE3 101 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 HES3Q5TGS1 186 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 IGSF10Q6WRI0 2623 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 SHISA6Q6ZSJ9 500 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 ZNF571Q7Z3V5 609 aaPredicted RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 OR4X2Q8NGF9 303 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 OR1J4Q8NGS1 313 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 OR52P1PQ8NH57 321 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 OSR1Q8TAX0 266 aaPredicted RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 NEUROG1Q92886 237 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 AQP10Q96PS8 301 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 SPRY4Q9C004 299 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 AK3Q9UIJ7 227 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 ZNF256Q9Y2P7 627 aaPredicted RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 AMMECR1Q9Y4X0 333 aaPredicted RBP4.25□□□□□ -1.73
VPS41-209ENST00000457055 MYH8P13535 1937 aa4.25□□□□□ -1.73
VPS41-209ENST00000457055 TRAV8-6A0A0B4J262 113 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 LOC101059948A0A1B0GTJ6 334 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 WI2-2373I1.2A0A1W2PRP0 233 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 TMEM235A6NFC5 223 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 SNURFLB1AK76 121 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 F5H5P2 479 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 H3BP45 60 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 UQCRQO14949 82 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 SS18L1O75177 396 aaPredicted RBP4.24□□□□□ -1.73
VPS41-209ENST00000457055 NAPSAO96009 420 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 RBMY1CP0DJD4 496 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 HINT1P49773 126 aaPredicted RBP4.24□□□□□ -1.73
VPS41-209ENST00000457055 B3GALT5-AS1P59052 145 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 ZNF90Q03938 601 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 RRN3P1Q2M238 152 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 KLF17Q5JT82 389 aaPredicted RBP4.24□□□□□ -1.73
VPS41-209ENST00000457055 FAM182AQ5T1J6 154 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 ATP1A1-AS1Q5TC04 95 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 CGB2Q6NT52 195 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 C19orf48Q6RUI8 117 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 ACP7Q6ZNF0 438 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 ATP5L2Q7Z4Y8 100 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 OR4A5Q8NH83 315 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 C2orf15Q8WU43 125 aaKnown RBP4.24□□□□□ -1.73
VPS41-209ENST00000457055 TMEM255BQ8WV15 326 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 ELSPBP1Q96BH3 223 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 SLC25A38Q96DW6 304 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 FAM19A4Q96LR4 140 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 IMMP2LQ96T52 175 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 OVOL2Q9BRP0 275 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 PAXXQ9BUH6 204 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 IMUPQ9GZP8 106 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 NAA60Q9H7X0 242 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 GNB4Q9HAV0 340 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 NEUROG3Q9Y4Z2 214 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 WDFY3Q8IZQ1 3526 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 DOCK6Q96HP0 2047 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 PIEZO2Q9H5I5 2752 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 SMG1Q96Q15 3661 aaKnown RBP4.24□□□□□ -1.73
VPS41-209ENST00000457055 CEP295Q9C0D2 2601 aa4.24□□□□□ -1.73
VPS41-209ENST00000457055 ITPR1Q14643 2758 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 TRAV27A0A087WT01 109 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 A0A087WWC5 75 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 C7orf77A4D0Y5 90 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 IZUMO1RA6ND01 250 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 TMEM250H0YL14 139 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 XKRYO14609 159 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 NDUFS5O43920 106 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 UBL3O95164 117 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 NGFP01138 241 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 PRB1P04280 392 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 TRGC1P0CF51 173 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 IGHV4-31P0DP07 118 aa4.23□□□□□ -1.73
VPS41-209ENST00000457055 PSMB2P49721 201 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms