RNA–Protein interactions for RNA: ENST00000456735.6

NF1-205, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 7,787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-205ENST00000456735 TRAV34A0A0B4J273 112 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 ZNF497Q6ZNH5 498 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 SLC7A5P1Q8MH63 180 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 LEPROTL1O95214 131 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 HBBP68871 147 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 DMRTA1Q5VZB9 504 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 TET1Q8NFU7 2136 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 LOC107984156A0A0G2JMH3 177 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 GRIFINA4D1Z8 144 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 TMEM50AO95807 157 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 IGHV3-53P01767 116 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 NAT1P18440 290 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 ARL17AQ8IVW1 177 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 FAM131CQ96AQ9 280 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 USF3Q68DE3 2245 aa4.91□□□□□ -1.62
NF1-205ENST00000456735 A0A1B0GUT8 65 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 FAM90A9PA6NNJ1 464 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 P2RY4P51582 365 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 FAM24BQ8N5W8 94 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 LINC00477Q96M19 166 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 VPREB3Q9UKI3 123 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 ADAMTSL1Q8N6G6 1762 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 CD28P10747 220 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 FAM3BP58499 235 aaPredicted RBP4.9□□□□□ -1.62
NF1-205ENST00000456735 ZNF79Q15937 498 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 Q6ZNX1 250 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 SLC25A48Q6ZT89 311 aaKnown RBP4.9□□□□□ -1.62
NF1-205ENST00000456735 GPHA2Q96T91 129 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 PSMG3Q9BT73 122 aaPredicted RBP4.9□□□□□ -1.62
NF1-205ENST00000456735 SDK2Q58EX2 2172 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 H3BQ15 152 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 MLNRO43193 412 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 CADM3Q8N126 398 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 FLVCR1-AS1Q8TAF5 88 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 TRAF4Q9BUZ4 470 aaPredicted RBP4.9□□□□□ -1.62
NF1-205ENST00000456735 ARFGEF1Q9Y6D6 1849 aa4.9□□□□□ -1.62
NF1-205ENST00000456735 TRBV6-7A0A0A0MS04 114 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 FCN3O75636 299 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 ZNF345Q14585 488 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 RNF151Q2KHN1 245 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 JKAMPQ9P055 326 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 DLEC1Q9Y238 1755 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 ZFHX2Q9C0A1 2572 aaPredicted RBP4.9□□□□□ -1.63
NF1-205ENST00000456735 A0A1B0GWJ7 208 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 SRRM4A7MD48 611 aaKnown RBP4.9□□□□□ -1.63
NF1-205ENST00000456735 CCL18P55774 89 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 TTC32Q5I0X7 151 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 TTC9CQ8N5M4 171 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 SRSF8Q9BRL6 282 aaKnown RBP4.9□□□□□ -1.63
NF1-205ENST00000456735 IGKV1D-43A0A0B4J1Z2 117 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 C7orf71A4D174 169 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 DIRC3C9JPN6 131 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 HSPB1P04792 205 aaKnown RBP4.9□□□□□ -1.63
NF1-205ENST00000456735 MORN3Q6PF18 240 aaPredicted RBP4.9□□□□□ -1.63
NF1-205ENST00000456735 DKK4Q9UBT3 224 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 NUP214P35658 2090 aaPredicted RBP4.9□□□□□ -1.63
NF1-205ENST00000456735 A0A087WV48 116 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 SOD3P08294 240 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 SLX1AQ9BQ83 275 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 CYSLTR1Q9Y271 337 aa4.9□□□□□ -1.63
NF1-205ENST00000456735 IFT22Q9H7X7 185 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 CCDC88CQ9P219 2028 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 ATAD5Q96QE3 1844 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 TNFRSF6BO95407 300 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 IRF3Q14653 427 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 TMEM136Q6ZRR5 245 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 GAFA1Q96PS6 74 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 RFNGQ9Y644 331 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 ROS1P08922 2347 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 WFDC12Q8WWY7 111 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.89□□□□□ -1.639e-7■■■■■ 32.5
NF1-205ENST00000456735 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.89□□□□□ -1.63
NF1-205ENST00000456735 RHODO00212 210 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 TCTAP57738 103 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 RPL24P83731 157 aaKnown RBP4.89□□□□□ -1.63
NF1-205ENST00000456735 AWAT1Q58HT5 328 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 RASL11AQ6T310 242 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 HIVEP2P31629 2446 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 C22orf46C9J442 243 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 DUTP33316 252 aaKnown RBP4.89□□□□□ -1.63
NF1-205ENST00000456735 LINC00158P58513 81 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 ARL6IP6Q8N6S5 226 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 SIGLEC9Q9Y336 463 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 IGKV3D-20A0A0C4DH25 116 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 F2Z2F3 143 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 FGF16O43320 207 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 TSPAN13O95857 204 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 GAS1P54826 345 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 CENPWQ5EE01 88 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 C6orf226Q5I0X4 101 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 OR10W1Q8NGF6 305 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 XCL2Q9UBD3 114 aa4.89□□□□□ -1.63
NF1-205ENST00000456735 MDC1Q14676 2089 aaKnown RBP4.89□□□□□ -1.63
NF1-205ENST00000456735 TRBV9A0A0B4J1U6 114 aa4.88□□□□□ -1.63
NF1-205ENST00000456735 RNF182Q8N6D2 247 aa4.88□□□□□ -1.63
NF1-205ENST00000456735 HLA-DQB1P01920 261 aa4.88□□□□□ -1.63
NF1-205ENST00000456735 FOXG1P55316 489 aaPredicted RBP4.88□□□□□ -1.63
NF1-205ENST00000456735 VWC2Q2TAL6 325 aa4.88□□□□□ -1.63
NF1-205ENST00000456735 TMEM256Q8N2U0 113 aa4.88□□□□□ -1.63
NF1-205ENST00000456735 OR10D4PQ8NGN7 298 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms