RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 IFNA4P05014 189 aa10.83□□□□□ -0.68
COL3A1-203ENST00000450867 PAX9P55771 341 aa10.83□□□□□ -0.68
COL3A1-203ENST00000450867 YPEL3P61236 119 aaPredicted RBP10.83□□□□□ -0.68
COL3A1-203ENST00000450867 TOMM20LQ6UXN7 152 aa10.83□□□□□ -0.68
COL3A1-203ENST00000450867 DYNLRB2Q8TF09 96 aa10.83□□□□□ -0.68
COL3A1-203ENST00000450867 C2orf50Q96LR7 162 aa10.83□□□□□ -0.68
COL3A1-203ENST00000450867 STRAPQ9Y3F4 350 aaKnown RBP10.83□□□□□ -0.68
COL3A1-203ENST00000450867 DNAH9Q9NYC9 4486 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 C7orf66A4D0T2 115 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 ZNF785A8K8V0 405 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 TSC22D2O75157 780 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 SCAF4O95104 1147 aaKnown RBP10.82□□□□□ -0.68
COL3A1-203ENST00000450867 OR10J1P30954 320 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 GAMTQ14353 236 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 TMEM14EPQ6UXP3 125 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 Q8N1Y9 231 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 NPIPB3Q92617 1050 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 GINS3Q9BRX5 216 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 C20orf24Q9BUV8 137 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 C11orf1Q9H5F2 150 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 SMPXQ9UHP9 88 aa10.82□□□□□ -0.68
COL3A1-203ENST00000450867 PUS1Q9Y606 427 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL3A1-203ENST00000450867 IGHV7-4-1A0A0J9YVY3 117 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 PMS2P5A8MQ11 134 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 SSSCA1O60232 199 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 TIGITQ495A1 244 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 SPANXN5Q5MJ07 72 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 BTNL8Q6UX41 500 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 GSG1LQ6UXU4 331 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 THAP8Q8NA92 274 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 SLC35E1Q96K37 410 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 GSKIPQ9P0R6 139 aa10.81□□□□□ -0.68
COL3A1-203ENST00000450867 IGKV1D-37A0A075B6S9 117 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 IGHV3OR16-8A0A075B7F1 116 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 C5orf51A6NDU8 294 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 A8MZ25 164 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 H3BP45 60 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 ACY3Q96HD9 319 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 VSIRQ9H7M9 311 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 PSENENQ9NZ42 101 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 SMAD5-AS1Q9Y6J3 95 aa10.8□□□□□ -0.68
COL3A1-203ENST00000450867 TRAV14DV4A0A0A6YYC5 116 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 FAM25EA8MYX2 175 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 K7EPK0 472 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 CHEK1O14757 476 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 TSPAN4O14817 238 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 YIF1AO95070 293 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 SCGB1D2O95969 90 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 TOMM40O96008 361 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 CRYBB3P26998 211 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 WDR89Q96FK6 387 aaPredicted RBP10.79□□□□□ -0.68
COL3A1-203ENST00000450867 B9D2Q9BPU9 175 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 RHPN1-AS1Q9BWJ2 59 aa10.79□□□□□ -0.68
COL3A1-203ENST00000450867 IGKV1OR2-108A0A075B7D4 117 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 ZNF207O43670 478 aaKnown RBP10.78□□□□□ -0.68
COL3A1-203ENST00000450867 CD5P06127 495 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 FAM90A2PQ658T7 463 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 Q8WTZ3 238 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 TRGV9Q99603 122 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 SPAG8Q99932 426 aaPredicted RBP10.78□□□□□ -0.68
COL3A1-203ENST00000450867 NMES1Q9C002 83 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 U3KQE9 123 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 STAB2Q8WWQ8 2551 aa10.78□□□□□ -0.68
COL3A1-203ENST00000450867 PSG1P11464 419 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 BMI1P35226 326 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 DLK1P80370 383 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 LAMTOR1Q6IAA8 161 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 ACOT7LQ6ZUV0 252 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 GTSCR1Q86UQ5 136 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 RNF2Q99496 336 aa10.77□□□□□ -0.69
COL3A1-203ENST00000450867 PAIP2BQ9ULR5 123 aaKnown RBP10.77□□□□□ -0.69
COL3A1-203ENST00000450867 TENM3Q9P273 2699 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 ZFP92A6NM28 416 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 GOSR2O14653 212 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 CCNKO75909 580 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 FABP1P07148 127 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 METTL15P1P0C7V9 234 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 RD3LP0DJH9 198 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 NPPCP23582 126 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 CYCSP99999 105 aaKnown RBP10.76□□□□□ -0.69
COL3A1-203ENST00000450867 RAB32Q13637 225 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 RBPMS2Q6ZRY4 209 aaKnown RBP10.76□□□□□ -0.69
COL3A1-203ENST00000450867 TMEM144Q7Z5S9 345 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 OR51G1Q8NGK1 321 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 ST8SIA2Q92186 375 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 METTL26Q96S19 204 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 FAM110AQ9BQ89 295 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 GGACTQ9BVM4 153 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 TMEM231Q9H6L2 316 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 C19orf73Q9NVV2 129 aa10.76□□□□□ -0.69
COL3A1-203ENST00000450867 LSM5Q9Y4Y9 91 aaKnown RBP10.76□□□□□ -0.69
COL3A1-203ENST00000450867 A0A1W2PS18 150 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 L7N2F9 121 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 APOHP02749 345 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-203ENST00000450867 IL4P05112 153 aa10.75□□□□□ -0.69
COL3A1-203ENST00000450867 PVALBP20472 110 aaPredicted RBP10.75□□□□□ -0.69
COL3A1-203ENST00000450867 H2BFSP57053 126 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms