RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 OR10D4PQ8NGN7 298 aa6.03□□□□□ -1.44
SYNE1-213ENST00000448038 SMUG1Q53HV7 270 aa6.02□□□□□ -1.44
SYNE1-213ENST00000448038 FGF23Q9GZV9 251 aaPredicted RBP6.02□□□□□ -1.44
SYNE1-213ENST00000448038 KAAG1Q9UBP8 84 aa6.02□□□□□ -1.44
SYNE1-213ENST00000448038 DNAH12Q6ZR08 3092 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 CCKARP32238 428 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 PAX8Q06710 450 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 SPRNQ5BIV9 151 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 PGLYRP4Q96LB8 373 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 IGHV1-69DA0A0B4J2H0 117 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 SCO2A0A1W2PP80 73 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 C15orf65H3BRN8 121 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 PEX7O00628 323 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 IGHV1-69P01742 117 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 DEFA6Q01524 100 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 GCSAMLQ5JQS6 135 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 TMEM14EPQ6UXP3 125 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 Q9H3A6 140 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 YTHDF2Q9Y5A9 579 aaKnown RBP6.02□□□□□ -1.45
SYNE1-213ENST00000448038 PHLDA3Q9Y5J5 127 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 ABCA1O95477 2261 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 MMP23AO75900 390 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 VENTXO95231 258 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 OR5AL1P0C617 328 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 RPS20P60866 119 aaKnown RBP6.02□□□□□ -1.45
SYNE1-213ENST00000448038 RRN3P1Q2M238 152 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 FAM209BQ5JX69 171 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 C11orf42Q8N5U0 333 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 C8orf46Q8TAG6 207 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 LIME1Q9H400 295 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 DOPEY2Q9Y3R5 2298 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 NOTCH2Q04721 2471 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 SYT8Q8NBV8 401 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 Q8NFD4 153 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 GGTLC1Q9BX51 225 aa6.02□□□□□ -1.45
SYNE1-213ENST00000448038 F11RQ9Y624 299 aaKnown RBP6.02□□□□□ -1.45
SYNE1-213ENST00000448038 M0R2Z0 102 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 EML6Q6ZMW3 1958 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-213ENST00000448038 PYYP10082 97 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 FCER1GP30273 86 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 SFRP2Q96HF1 295 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.01□□□□□ -1.45
SYNE1-213ENST00000448038 WIPF3A6NGB9 483 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 SRP19P09132 144 aaKnown RBP6.01□□□□□ -1.45
SYNE1-213ENST00000448038 SRD5A1P18405 259 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 TOMM20LQ6UXN7 152 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 Q6ZSR3 168 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 ZNF329Q86UD4 541 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 GPR82Q96P67 336 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 CREBBPQ92793 2442 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 A0A1B0GWJ7 208 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 IGHV2-70P01814 119 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 AREGP15514 252 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 ZNF343Q6P1L6 599 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 FAM159AQ6UWV7 190 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 ZNF833PQ6ZTB9 187 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 KLF2Q9Y5W3 355 aaPredicted RBP6.01□□□□□ -1.45
SYNE1-213ENST00000448038 LRP4O75096 1905 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 PHOX2AO14813 284 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 PRSS1P07477 247 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 PSG1P11464 419 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 CD99P14209 185 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 TMEM116Q8NCL8 245 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 VSIRQ9H7M9 311 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 CTSZQ9UBR2 303 aa6.01□□□□□ -1.45
SYNE1-213ENST00000448038 GGCTO75223 188 aaKnown RBP6□□□□□ -1.45
SYNE1-213ENST00000448038 NUTF2P61970 127 aaKnown RBP6□□□□□ -1.45
SYNE1-213ENST00000448038 NSUN5P1Q3KNT7 163 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 LINC00311Q8N616 119 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 C15orf62A8K5M9 175 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 MT-ND6P03923 174 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 MEOX2P50222 304 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 ZNF134P52741 427 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 OTORQ9NRC9 128 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 C22orf46C9J442 243 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 CNTFRP26992 372 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 CR1LQ2VPA4 569 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 REG4Q9BYZ8 158 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 GSX1Q9H4S2 264 aaPredicted RBP6□□□□□ -1.45
SYNE1-213ENST00000448038 LOC389332A0A1B0GUA5 103 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 LHBP01229 141 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 GCGP01275 180 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 RNASE2P10153 161 aaKnown RBP6□□□□□ -1.45
SYNE1-213ENST00000448038 FBXL19-AS1Q494R0 122 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 KIR3DL3Q8N743 410 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 OR5AN1Q8NGI8 311 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 MGST2Q99735 147 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 SLC50A1Q9BRV3 221 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 TUBA4BQ9H853 241 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 CYTL1Q9NRR1 136 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 PRR14LQ5THK1 2151 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 IGHV2-5P01817 119 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 SRSF4Q08170 494 aaKnown RBP6□□□□□ -1.45
SYNE1-213ENST00000448038 SAMD13Q5VXD3 122 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 ZNF562Q6V9R5 426 aa6□□□□□ -1.45
SYNE1-213ENST00000448038 MED12LQ86YW9 2145 aa5.99□□□□□ -1.45
SYNE1-213ENST00000448038 TRAV5A0A0B4J249 113 aa5.99□□□□□ -1.45
SYNE1-213ENST00000448038 A0A1W2PPI3 338 aa5.99□□□□□ -1.45
SYNE1-213ENST00000448038 CKS2P33552 79 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms