RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ATXN8Q156A1 80 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 RNF115Q9Y4L5 304 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 TRAV2A0A0B4J234 112 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 TCRBV4S1A1TA0A5B7 111 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 LYZL4Q96KX0 146 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 C21orf62Q9NYP8 219 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 PRTN3P24158 256 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 TREML4Q6UXN2 200 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 DLX4Q92988 240 aaPredicted RBP15.51■□□□□ 0.07
SHANK3-203ENST00000445220 IMMP1LQ96LU5 166 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 SPANXA1Q9NS26 97 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 LCTP09848 1927 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 SPINK8P0C7L1 97 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 CD69Q07108 199 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 TMEM249Q2WGJ8 235 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 MRPL14Q6P1L8 145 aaKnown RBP15.51■□□□□ 0.07
SHANK3-203ENST00000445220 CLEC2AQ6UVW9 174 aa15.51■□□□□ 0.07
SHANK3-203ENST00000445220 OTOFQ9HC10 1997 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 IGHV3OR16-12A0A075B7B8 117 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 RNF182Q8N6D2 247 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 FBXL15Q9H469 300 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 LTBP1Q14766 1721 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 MST1LQ2TV78 715 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 C1orf162Q8NEQ5 155 aaPredicted RBP15.5■□□□□ 0.07
SHANK3-203ENST00000445220 GGTLC1Q9BX51 225 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 CACNA1DQ01668 2161 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 SRSF7Q16629 238 aaKnown RBP eCLIP15.5■□□□□ 0.073e-8■■■□□ 18
SHANK3-203ENST00000445220 FAM90A2PQ658T7 463 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 TMEM101Q96IK0 257 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 DCTN5Q9BTE1 182 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 YPEL1O60688 119 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 SAA1P0DJI8 122 aaPredicted RBP15.5■□□□□ 0.07
SHANK3-203ENST00000445220 YPEL2Q96QA6 119 aa15.5■□□□□ 0.07
SHANK3-203ENST00000445220 EFEMP2O95967 443 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 ZNF497Q6ZNH5 498 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 NPSP0C0P6 89 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 RFPL3SP0C7P2 107 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 GLRXP35754 106 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 GAGE1Q13065 139 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 MRPL20Q9BYC9 149 aaKnown RBP15.49■□□□□ 0.07
SHANK3-203ENST00000445220 TRAV8-1A0A0A6YYK1 113 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 NMSQ5H8A3 153 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 GTSCR1Q86UQ5 136 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 FAM90A1Q86YD7 464 aa15.49■□□□□ 0.07
SHANK3-203ENST00000445220 IFI27P40305 119 aaPredicted RBP15.48■□□□□ 0.07
SHANK3-203ENST00000445220 RPRMLQ8N4K4 120 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 LINC01549A6NIU2 74 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 SLC25A15Q9Y619 301 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 PAX1P15863 534 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 FAM166AQ6J272 317 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 ADAMTSL5Q6ZMM2 481 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 DMRTC2Q8IXT2 367 aaPredicted RBP15.48■□□□□ 0.07
SHANK3-203ENST00000445220 HGFACQ04756 655 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 TMEM155Q4W5P6 130 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 KLF17Q5JT82 389 aaPredicted RBP15.48■□□□□ 0.07
SHANK3-203ENST00000445220 TMEM190Q8WZ59 177 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 WBP1Q96G27 269 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 ZNF319Q9P2F9 582 aa15.48■□□□□ 0.07
SHANK3-203ENST00000445220 ATP1A1-AS1Q5TC04 95 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 FAM71F2Q6NXP2 309 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 RFNGQ9Y644 331 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 C9JQL5 133 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 OR9G9P0C7N8 305 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 PRCDQ00LT1 54 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 PVRIGQ6DKI7 326 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 FLVCR1-AS1Q8TAF5 88 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 LOC102723996A0A087X1L8 192 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 IGHV2-5P01817 119 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 Q0VG73 95 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 FBXL7Q9UJT9 491 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 SIGLEC12Q96PQ1 595 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 SNRNP200O75643 2136 aaKnown RBP15.47■□□□□ 0.07
SHANK3-203ENST00000445220 F2Z2F3 143 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 CSRP1P21291 193 aaKnown RBP15.47■□□□□ 0.07
SHANK3-203ENST00000445220 TMEM14EPQ6UXP3 125 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 FDCSPQ8NFU4 85 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 S4R3C0 116 aa15.47■□□□□ 0.07
SHANK3-203ENST00000445220 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.46■□□□□ 0.07
SHANK3-203ENST00000445220 B9A039 149 aa15.46■□□□□ 0.07
SHANK3-203ENST00000445220 PSG3Q16557 428 aa15.46■□□□□ 0.07
SHANK3-203ENST00000445220 ZNF837Q96EG3 531 aaPredicted RBP15.46■□□□□ 0.07
SHANK3-203ENST00000445220 SAA2-SAA4A0A096LPE2 208 aa15.46■□□□□ 0.07
SHANK3-203ENST00000445220 IGLV3-32A0A0A0MS00 114 aa15.46■□□□□ 0.07
SHANK3-203ENST00000445220 SAA2P0DJI9 122 aaPredicted RBP15.46■□□□□ 0.07
SHANK3-203ENST00000445220 PGPEP1Q9NXJ5 209 aa15.46■□□□□ 0.06
SHANK3-203ENST00000445220 PDCD11Q14690 1871 aaKnown RBP15.45■□□□□ 0.06
SHANK3-203ENST00000445220 IGHV3-49A0A0A0MS15 119 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 EVI2AP22794 236 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 SLC50A1Q9BRV3 221 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 NPFFR1Q9GZQ6 430 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 IGHV3-66A0A0C4DH42 116 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 CD300EQ496F6 205 aaPredicted RBP15.45■□□□□ 0.06
SHANK3-203ENST00000445220 LOC105371242A0A075B767 164 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 IGKV3-20P01619 116 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 IGHV3-23P01764 117 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 DUTP33316 252 aaKnown RBP15.45■□□□□ 0.06
SHANK3-203ENST00000445220 HEATR5BQ9P2D3 2071 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 TDGF1P13385 188 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 TTC28Q96AY4 2481 aa15.45■□□□□ 0.06
SHANK3-203ENST00000445220 SCN8AQ9UQD0 1980 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms